Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS10150

Experiment: root EcoFAB sample 1; outgrowth in LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR87_RS10140 and ABZR87_RS10145 are separated by 14 nucleotidesABZR87_RS10145 and ABZR87_RS10150 are separated by 185 nucleotidesABZR87_RS10150 and ABZR87_RS10155 are separated by 113 nucleotides ABZR87_RS10140: ABZR87_RS10140 - ACP S-malonyltransferase, at 2,153,350 to 2,154,279 _RS10140 ABZR87_RS10145: ABZR87_RS10145 - 3-oxoacyl-ACP reductase FabG, at 2,154,294 to 2,155,043 _RS10145 ABZR87_RS10150: ABZR87_RS10150 - acyl carrier protein, at 2,155,229 to 2,155,468 _RS10150 ABZR87_RS10155: ABZR87_RS10155 - beta-ketoacyl-ACP synthase II, at 2,155,582 to 2,156,814 _RS10155 Position (kb) 2155 2156Strain fitness (log2 ratio) -1 0 1at 2154.277 kb on + strandat 2154.277 kb on + strandat 2154.293 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction root EcoFAB sample 1; outgrowth in LB
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2,154,277 + +0.2
2,154,277 + +0.3
2,154,293 + +0.0

Or see this region's nucleotide sequence