Experiment: 4 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2449 and DvMF_2450 are separated by 96 nucleotides DvMF_2450 and DvMF_2451 are separated by 81 nucleotides
DvMF_2449: DvMF_2449 - formamidopyrimidine-DNA glycosylase (RefSeq), at 3,083,870 to 3,084,880
_2449
DvMF_2450: DvMF_2450 - ComEC/Rec2-related protein (RefSeq), at 3,084,977 to 3,088,279
_2450
DvMF_2451: DvMF_2451 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase (RefSeq), at 3,088,361 to 3,089,614
_2451
Position (kb)
3084
3085
3086
3087
3088
3089 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3083.998 kb on + strand, within DvMF_2449 at 3084.056 kb on + strand, within DvMF_2449 at 3084.571 kb on + strand, within DvMF_2449 at 3084.770 kb on - strand, within DvMF_2449 at 3084.843 kb on + strand at 3084.954 kb on + strand at 3085.083 kb on + strand at 3085.591 kb on + strand, within DvMF_2450 at 3085.806 kb on + strand, within DvMF_2450 at 3085.929 kb on + strand, within DvMF_2450 at 3085.987 kb on - strand, within DvMF_2450 at 3086.326 kb on - strand, within DvMF_2450 at 3086.358 kb on + strand, within DvMF_2450 at 3086.466 kb on - strand, within DvMF_2450 at 3086.556 kb on + strand, within DvMF_2450 at 3086.682 kb on + strand, within DvMF_2450 at 3086.695 kb on - strand, within DvMF_2450 at 3086.778 kb on + strand, within DvMF_2450 at 3086.791 kb on - strand, within DvMF_2450 at 3086.892 kb on + strand, within DvMF_2450 at 3086.892 kb on + strand, within DvMF_2450 at 3086.900 kb on - strand, within DvMF_2450 at 3086.900 kb on - strand, within DvMF_2450 at 3086.967 kb on - strand, within DvMF_2450 at 3087.037 kb on + strand, within DvMF_2450 at 3087.045 kb on - strand, within DvMF_2450 at 3087.246 kb on - strand, within DvMF_2450 at 3087.500 kb on + strand, within DvMF_2450 at 3087.509 kb on - strand, within DvMF_2450 at 3088.342 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 4 days starvation 37C remove 3,083,998 + DvMF_2449 0.13 -0.5 3,084,056 + DvMF_2449 0.18 -1.9 3,084,571 + DvMF_2449 0.69 -2.5 3,084,770 - DvMF_2449 0.89 -0.7 3,084,843 + +0.7 3,084,954 + -0.2 3,085,083 + -1.0 3,085,591 + DvMF_2450 0.19 +1.8 3,085,806 + DvMF_2450 0.25 -0.8 3,085,929 + DvMF_2450 0.29 -2.9 3,085,987 - DvMF_2450 0.31 -1.1 3,086,326 - DvMF_2450 0.41 -0.8 3,086,358 + DvMF_2450 0.42 -0.5 3,086,466 - DvMF_2450 0.45 -0.1 3,086,556 + DvMF_2450 0.48 -0.3 3,086,682 + DvMF_2450 0.52 -0.5 3,086,695 - DvMF_2450 0.52 +0.3 3,086,778 + DvMF_2450 0.55 -1.2 3,086,791 - DvMF_2450 0.55 -0.5 3,086,892 + DvMF_2450 0.58 -0.2 3,086,892 + DvMF_2450 0.58 -0.2 3,086,900 - DvMF_2450 0.58 -0.8 3,086,900 - DvMF_2450 0.58 -1.8 3,086,967 - DvMF_2450 0.60 -0.6 3,087,037 + DvMF_2450 0.62 -0.7 3,087,045 - DvMF_2450 0.63 +1.8 3,087,246 - DvMF_2450 0.69 -0.8 3,087,500 + DvMF_2450 0.76 -0.6 3,087,509 - DvMF_2450 0.77 -0.2 3,088,342 - +0.4
Or see this region's nucleotide sequence