Experiment: 4 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1782 and DvMF_1783 are separated by 236 nucleotides DvMF_1783 and DvMF_1784 are separated by 310 nucleotides DvMF_1784 and DvMF_1785 are separated by 420 nucleotides DvMF_1785 and DvMF_1786 are separated by 199 nucleotides
DvMF_1782: DvMF_1782 - CheD (RefSeq), at 2,182,252 to 2,182,956
_1782
DvMF_1783: DvMF_1783 - histone family protein DNA-binding protein (RefSeq), at 2,183,193 to 2,183,468
_1783
DvMF_1784: DvMF_1784 - membrane-bound metal-dependent hydrolase (RefSeq), at 2,183,779 to 2,184,876
_1784
DvMF_1785: DvMF_1785 - no description, at 2,185,297 to 2,185,551
_1785
DvMF_1786: DvMF_1786 - protein of unknown function DUF523 (RefSeq), at 2,185,751 to 2,186,758
_1786
Position (kb)
2183
2184
2185 Strain fitness (log2 ratio)
-1
0
1 at 2182.863 kb on + strand, within DvMF_1782 at 2182.863 kb on - strand, within DvMF_1782 at 2182.920 kb on - strand at 2182.970 kb on + strand at 2182.971 kb on + strand at 2182.985 kb on - strand at 2183.035 kb on - strand at 2183.361 kb on - strand, within DvMF_1783 at 2183.397 kb on - strand, within DvMF_1783 at 2183.505 kb on + strand at 2183.626 kb on - strand at 2183.902 kb on - strand, within DvMF_1784 at 2183.903 kb on + strand, within DvMF_1784 at 2184.053 kb on + strand, within DvMF_1784 at 2184.093 kb on - strand, within DvMF_1784 at 2184.144 kb on + strand, within DvMF_1784 at 2184.144 kb on + strand, within DvMF_1784 at 2184.152 kb on - strand, within DvMF_1784 at 2184.192 kb on + strand, within DvMF_1784 at 2184.330 kb on - strand, within DvMF_1784 at 2184.359 kb on + strand, within DvMF_1784 at 2184.359 kb on + strand, within DvMF_1784 at 2184.364 kb on + strand, within DvMF_1784 at 2184.367 kb on - strand, within DvMF_1784 at 2184.385 kb on + strand, within DvMF_1784 at 2184.463 kb on - strand, within DvMF_1784 at 2184.573 kb on + strand, within DvMF_1784 at 2184.667 kb on + strand, within DvMF_1784 at 2184.681 kb on - strand, within DvMF_1784 at 2184.710 kb on + strand, within DvMF_1784 at 2184.720 kb on + strand, within DvMF_1784 at 2184.781 kb on + strand at 2184.781 kb on + strand at 2184.781 kb on + strand at 2184.836 kb on - strand at 2184.998 kb on + strand at 2185.342 kb on - strand, within DvMF_1785 at 2185.356 kb on + strand, within DvMF_1785 at 2185.364 kb on - strand, within DvMF_1785
Per-strain Table
Position Strand Gene LocusTag Fraction 4 days starvation 37C remove 2,182,863 + DvMF_1782 0.87 -0.0 2,182,863 - DvMF_1782 0.87 -1.3 2,182,920 - +0.1 2,182,970 + +0.3 2,182,971 + -1.5 2,182,985 - -0.8 2,183,035 - -0.3 2,183,361 - DvMF_1783 0.61 -0.8 2,183,397 - DvMF_1783 0.74 -0.2 2,183,505 + -1.2 2,183,626 - -0.9 2,183,902 - DvMF_1784 0.11 -0.2 2,183,903 + DvMF_1784 0.11 +1.0 2,184,053 + DvMF_1784 0.25 -0.5 2,184,093 - DvMF_1784 0.29 +0.2 2,184,144 + DvMF_1784 0.33 -0.3 2,184,144 + DvMF_1784 0.33 -0.6 2,184,152 - DvMF_1784 0.34 -0.2 2,184,192 + DvMF_1784 0.38 -0.4 2,184,330 - DvMF_1784 0.50 +0.5 2,184,359 + DvMF_1784 0.53 -0.6 2,184,359 + DvMF_1784 0.53 -1.5 2,184,364 + DvMF_1784 0.53 -0.2 2,184,367 - DvMF_1784 0.54 -1.3 2,184,385 + DvMF_1784 0.55 -0.8 2,184,463 - DvMF_1784 0.62 -0.4 2,184,573 + DvMF_1784 0.72 +0.6 2,184,667 + DvMF_1784 0.81 -0.6 2,184,681 - DvMF_1784 0.82 -0.0 2,184,710 + DvMF_1784 0.85 -0.3 2,184,720 + DvMF_1784 0.86 +1.2 2,184,781 + -0.3 2,184,781 + -0.4 2,184,781 + -1.1 2,184,836 - -0.4 2,184,998 + -0.4 2,185,342 - DvMF_1785 0.18 -0.9 2,185,356 + DvMF_1785 0.23 -0.6 2,185,364 - DvMF_1785 0.26 -0.3
Or see this region's nucleotide sequence