Experiment: 4 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1771 and DvMF_1772 are separated by 86 nucleotides DvMF_1772 and DvMF_1773 are separated by 99 nucleotides DvMF_1773 and DvMF_1774 are separated by 112 nucleotides
DvMF_1771: DvMF_1771 - hypothetical protein (RefSeq), at 2,167,524 to 2,167,814
_1771
DvMF_1772: DvMF_1772 - response regulator receiver protein (RefSeq), at 2,167,901 to 2,168,356
_1772
DvMF_1773: DvMF_1773 - response regulator receiver sensor signal transduction histidine kinase (RefSeq), at 2,168,456 to 2,169,682
_1773
DvMF_1774: DvMF_1774 - hypothetical protein (RefSeq), at 2,169,795 to 2,170,553
_1774
Position (kb)
2168
2169
2170 Strain fitness (log2 ratio)
-2
-1
0
1 at 2167.900 kb on + strand at 2168.096 kb on + strand, within DvMF_1772 at 2168.237 kb on - strand, within DvMF_1772 at 2168.303 kb on - strand, within DvMF_1772 at 2169.026 kb on + strand, within DvMF_1773 at 2169.080 kb on + strand, within DvMF_1773 at 2169.140 kb on - strand, within DvMF_1773 at 2169.390 kb on + strand, within DvMF_1773 at 2169.390 kb on + strand, within DvMF_1773 at 2169.463 kb on - strand, within DvMF_1773 at 2169.484 kb on - strand, within DvMF_1773 at 2169.484 kb on - strand, within DvMF_1773 at 2169.539 kb on + strand, within DvMF_1773 at 2169.542 kb on - strand, within DvMF_1773 at 2169.552 kb on - strand, within DvMF_1773 at 2169.676 kb on + strand at 2169.694 kb on + strand at 2169.920 kb on + strand, within DvMF_1774 at 2170.047 kb on + strand, within DvMF_1774 at 2170.618 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 4 days starvation 37C remove 2,167,900 + -0.1 2,168,096 + DvMF_1772 0.43 +0.4 2,168,237 - DvMF_1772 0.74 -0.7 2,168,303 - DvMF_1772 0.88 +0.2 2,169,026 + DvMF_1773 0.46 -2.3 2,169,080 + DvMF_1773 0.51 -0.9 2,169,140 - DvMF_1773 0.56 -2.3 2,169,390 + DvMF_1773 0.76 -1.0 2,169,390 + DvMF_1773 0.76 +0.2 2,169,463 - DvMF_1773 0.82 -0.8 2,169,484 - DvMF_1773 0.84 -1.8 2,169,484 - DvMF_1773 0.84 -0.8 2,169,539 + DvMF_1773 0.88 -1.7 2,169,542 - DvMF_1773 0.89 +0.6 2,169,552 - DvMF_1773 0.89 -1.0 2,169,676 + -0.9 2,169,694 + -1.2 2,169,920 + DvMF_1774 0.16 +0.1 2,170,047 + DvMF_1774 0.33 -0.5 2,170,618 - -1.0
Or see this region's nucleotide sequence