Experiment: 4 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1433 and DvMF_1434 are separated by 342 nucleotides DvMF_1434 and DvMF_1435 are separated by 284 nucleotides
DvMF_1433: DvMF_1433 - iron-containing alcohol dehydrogenase (RefSeq), at 1,754,175 to 1,755,470
_1433
DvMF_1434: DvMF_1434 - DNA-directed DNA polymerase (RefSeq), at 1,755,813 to 1,757,306
_1434
DvMF_1435: DvMF_1435 - peptidase S24 and S26 domain protein (RefSeq), at 1,757,591 to 1,758,043
_1435
Position (kb)
1755
1756
1757
1758 Strain fitness (log2 ratio)
-1
0
1 at 1754.888 kb on - strand, within DvMF_1433 at 1755.035 kb on - strand, within DvMF_1433 at 1755.256 kb on - strand, within DvMF_1433 at 1755.383 kb on - strand at 1755.419 kb on - strand at 1755.440 kb on + strand at 1755.686 kb on - strand at 1755.826 kb on + strand at 1755.855 kb on + strand at 1756.052 kb on + strand, within DvMF_1434 at 1756.052 kb on + strand, within DvMF_1434 at 1756.070 kb on - strand, within DvMF_1434 at 1756.097 kb on - strand, within DvMF_1434 at 1756.181 kb on - strand, within DvMF_1434 at 1756.521 kb on - strand, within DvMF_1434 at 1756.571 kb on + strand, within DvMF_1434 at 1756.865 kb on + strand, within DvMF_1434 at 1756.909 kb on - strand, within DvMF_1434 at 1756.909 kb on - strand, within DvMF_1434 at 1756.990 kb on + strand, within DvMF_1434 at 1756.998 kb on - strand, within DvMF_1434 at 1757.068 kb on + strand, within DvMF_1434 at 1757.068 kb on + strand, within DvMF_1434 at 1757.317 kb on + strand at 1757.567 kb on - strand at 1757.605 kb on + strand at 1757.630 kb on - strand at 1757.834 kb on - strand, within DvMF_1435 at 1757.894 kb on + strand, within DvMF_1435 at 1758.077 kb on - strand at 1758.077 kb on - strand at 1758.160 kb on + strand at 1758.243 kb on + strand at 1758.274 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 4 days starvation 37C remove 1,754,888 - DvMF_1433 0.55 -0.6 1,755,035 - DvMF_1433 0.66 -0.8 1,755,256 - DvMF_1433 0.83 -1.3 1,755,383 - -0.8 1,755,419 - -0.6 1,755,440 + +0.5 1,755,686 - -0.8 1,755,826 + +0.1 1,755,855 + +0.3 1,756,052 + DvMF_1434 0.16 -0.7 1,756,052 + DvMF_1434 0.16 -0.2 1,756,070 - DvMF_1434 0.17 -0.6 1,756,097 - DvMF_1434 0.19 +0.7 1,756,181 - DvMF_1434 0.25 +0.5 1,756,521 - DvMF_1434 0.47 -1.3 1,756,571 + DvMF_1434 0.51 -0.2 1,756,865 + DvMF_1434 0.70 -1.2 1,756,909 - DvMF_1434 0.73 -0.8 1,756,909 - DvMF_1434 0.73 -0.9 1,756,990 + DvMF_1434 0.79 -0.3 1,756,998 - DvMF_1434 0.79 -0.8 1,757,068 + DvMF_1434 0.84 +0.1 1,757,068 + DvMF_1434 0.84 -1.3 1,757,317 + -0.7 1,757,567 - -0.6 1,757,605 + -0.1 1,757,630 - -0.8 1,757,834 - DvMF_1435 0.54 -0.9 1,757,894 + DvMF_1435 0.67 -0.8 1,758,077 - -1.0 1,758,077 - -0.7 1,758,160 + -0.7 1,758,243 + +1.5 1,758,274 - -0.5
Or see this region's nucleotide sequence