Experiment: 4 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1091 and DvMF_1092 are separated by 168 nucleotides DvMF_1092 and DvMF_1093 overlap by 10 nucleotides DvMF_1093 and DvMF_1094 are separated by 294 nucleotides
DvMF_1091: DvMF_1091 - single-strand binding protein/Primosomal replication protein n (RefSeq), at 1,334,256 to 1,334,786
_1091
DvMF_1092: DvMF_1092 - hypothetical protein (RefSeq), at 1,334,955 to 1,335,386
_1092
DvMF_1093: DvMF_1093 - hypothetical protein (RefSeq), at 1,335,377 to 1,335,685
_1093
DvMF_1094: DvMF_1094 - putative phage repressor (RefSeq), at 1,335,980 to 1,336,729
_1094
Position (kb) 1335
1336 Strain fitness (log2 ratio) -1
0
1 at 1334.437 kb on + strand, within DvMF_1091 at 1334.585 kb on + strand, within DvMF_1091 at 1334.762 kb on + strand at 1334.812 kb on + strand at 1334.985 kb on + strand at 1335.220 kb on + strand, within DvMF_1092 at 1335.256 kb on + strand, within DvMF_1092 at 1335.274 kb on + strand, within DvMF_1092 at 1335.564 kb on - strand, within DvMF_1093 at 1335.565 kb on + strand, within DvMF_1093 at 1335.869 kb on - strand at 1335.869 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 4 days starvation 37C remove 1,334,437 + DvMF_1091 0.34 -1.1 1,334,585 + DvMF_1091 0.62 -0.6 1,334,762 + -1.2 1,334,812 + -1.1 1,334,985 + +1.5 1,335,220 + DvMF_1092 0.61 -1.4 1,335,256 + DvMF_1092 0.70 +0.6 1,335,274 + DvMF_1092 0.74 -0.2 1,335,564 - DvMF_1093 0.61 -1.4 1,335,565 + DvMF_1093 0.61 -0.6 1,335,869 - +1.4 1,335,869 - -1.3
Or see this region's nucleotide sequence