Experiment: 4 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0932 and DvMF_0933 are separated by 2 nucleotides DvMF_0933 and DvMF_0934 are separated by 103 nucleotides DvMF_0934 and DvMF_0935 are separated by 98 nucleotides
DvMF_0932: DvMF_0932 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 1,131,176 to 1,131,763
_0932
DvMF_0933: DvMF_0933 - molybdopterin-containing oxidoreductase membrane anchor subunit (RefSeq), at 1,131,766 to 1,132,599
_0933
DvMF_0934: DvMF_0934 - Tetratricopeptide domain protein (RefSeq), at 1,132,703 to 1,133,608
_0934
DvMF_0935: DvMF_0935 - glycoside hydrolase family 57 (RefSeq), at 1,133,707 to 1,136,172
_0935
Position (kb)
1132
1133
1134 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1131.756 kb on + strand at 1131.760 kb on - strand at 1131.793 kb on - strand at 1131.835 kb on - strand at 1132.115 kb on + strand, within DvMF_0933 at 1132.178 kb on + strand, within DvMF_0933 at 1132.178 kb on + strand, within DvMF_0933 at 1132.423 kb on + strand, within DvMF_0933 at 1132.431 kb on - strand, within DvMF_0933 at 1132.510 kb on - strand, within DvMF_0933 at 1132.589 kb on + strand at 1132.605 kb on + strand at 1132.694 kb on - strand at 1132.832 kb on + strand, within DvMF_0934 at 1132.849 kb on + strand, within DvMF_0934 at 1133.067 kb on - strand, within DvMF_0934 at 1133.111 kb on + strand, within DvMF_0934 at 1133.111 kb on + strand, within DvMF_0934 at 1133.111 kb on + strand, within DvMF_0934 at 1133.111 kb on + strand, within DvMF_0934 at 1133.111 kb on + strand, within DvMF_0934 at 1133.119 kb on - strand, within DvMF_0934 at 1133.135 kb on + strand, within DvMF_0934 at 1133.608 kb on - strand at 1133.608 kb on - strand at 1133.676 kb on + strand at 1133.948 kb on + strand at 1133.989 kb on - strand, within DvMF_0935 at 1134.027 kb on - strand, within DvMF_0935 at 1134.051 kb on - strand, within DvMF_0935 at 1134.090 kb on + strand, within DvMF_0935 at 1134.276 kb on + strand, within DvMF_0935 at 1134.284 kb on - strand, within DvMF_0935 at 1134.335 kb on - strand, within DvMF_0935
Per-strain Table
Position Strand Gene LocusTag Fraction 4 days starvation 37C remove 1,131,756 + -0.9 1,131,760 - -0.4 1,131,793 - -0.3 1,131,835 - -0.7 1,132,115 + DvMF_0933 0.42 -0.6 1,132,178 + DvMF_0933 0.49 -0.5 1,132,178 + DvMF_0933 0.49 -0.3 1,132,423 + DvMF_0933 0.79 +2.1 1,132,431 - DvMF_0933 0.80 -0.4 1,132,510 - DvMF_0933 0.89 -0.8 1,132,589 + -0.2 1,132,605 + -2.0 1,132,694 - +0.2 1,132,832 + DvMF_0934 0.14 -0.2 1,132,849 + DvMF_0934 0.16 -0.1 1,133,067 - DvMF_0934 0.40 -0.1 1,133,111 + DvMF_0934 0.45 -1.0 1,133,111 + DvMF_0934 0.45 +0.1 1,133,111 + DvMF_0934 0.45 -0.5 1,133,111 + DvMF_0934 0.45 -0.2 1,133,111 + DvMF_0934 0.45 +0.4 1,133,119 - DvMF_0934 0.46 +0.2 1,133,135 + DvMF_0934 0.48 -0.3 1,133,608 - -0.3 1,133,608 - -0.3 1,133,676 + -0.3 1,133,948 + -0.5 1,133,989 - DvMF_0935 0.11 +0.0 1,134,027 - DvMF_0935 0.13 +0.3 1,134,051 - DvMF_0935 0.14 -0.5 1,134,090 + DvMF_0935 0.16 -3.2 1,134,276 + DvMF_0935 0.23 -0.3 1,134,284 - DvMF_0935 0.23 -0.2 1,134,335 - DvMF_0935 0.25 -1.2
Or see this region's nucleotide sequence