Experiment: 4 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0239 and DvMF_0240 are separated by 245 nucleotides DvMF_0240 and DvMF_0241 are separated by 87 nucleotides DvMF_0241 and DvMF_0242 are separated by 82 nucleotides
DvMF_0239: DvMF_0239 - Beta tubulin, autoregulation binding site (RefSeq), at 269,193 to 271,886
_0239
DvMF_0240: DvMF_0240 - hypothetical protein (RefSeq), at 272,132 to 272,500
_0240
DvMF_0241: DvMF_0241 - major facilitator superfamily MFS_1 (RefSeq), at 272,588 to 273,805
_0241
DvMF_0242: DvMF_0242 - DRTGG domain protein (RefSeq), at 273,888 to 274,952
_0242
Position (kb) 272
273
274 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 271.683 kb on + strand at 271.725 kb on + strand at 271.796 kb on + strand at 271.796 kb on + strand at 271.796 kb on + strand at 271.804 kb on - strand at 271.804 kb on - strand at 271.804 kb on - strand at 271.804 kb on - strand at 271.855 kb on + strand at 271.863 kb on - strand at 271.869 kb on + strand at 271.869 kb on + strand at 272.028 kb on - strand at 272.182 kb on - strand, within DvMF_0240 at 272.396 kb on + strand, within DvMF_0240 at 272.396 kb on + strand, within DvMF_0240 at 272.636 kb on - strand at 272.656 kb on + strand at 272.800 kb on - strand, within DvMF_0241 at 273.113 kb on - strand, within DvMF_0241 at 273.128 kb on + strand, within DvMF_0241 at 273.136 kb on - strand, within DvMF_0241 at 273.268 kb on + strand, within DvMF_0241 at 273.359 kb on - strand, within DvMF_0241 at 273.720 kb on + strand at 273.747 kb on + strand at 273.787 kb on + strand at 273.893 kb on - strand at 274.090 kb on + strand, within DvMF_0242 at 274.264 kb on + strand, within DvMF_0242 at 274.269 kb on + strand, within DvMF_0242 at 274.344 kb on - strand, within DvMF_0242 at 274.390 kb on + strand, within DvMF_0242 at 274.437 kb on + strand, within DvMF_0242 at 274.469 kb on + strand, within DvMF_0242 at 274.469 kb on + strand, within DvMF_0242 at 274.477 kb on - strand, within DvMF_0242 at 274.508 kb on - strand, within DvMF_0242 at 274.592 kb on + strand, within DvMF_0242 at 274.594 kb on - strand, within DvMF_0242
Per-strain Table
Position Strand Gene LocusTag Fraction 4 days starvation 37C remove 271,683 + +0.6 271,725 + -1.4 271,796 + -1.0 271,796 + +0.9 271,796 + -0.6 271,804 - -1.8 271,804 - -0.8 271,804 - +0.1 271,804 - -0.7 271,855 + +0.3 271,863 - -1.5 271,869 + -0.9 271,869 + -0.8 272,028 - -0.1 272,182 - DvMF_0240 0.14 -0.1 272,396 + DvMF_0240 0.72 -2.1 272,396 + DvMF_0240 0.72 +0.7 272,636 - -0.5 272,656 + +1.4 272,800 - DvMF_0241 0.17 -0.3 273,113 - DvMF_0241 0.43 -1.2 273,128 + DvMF_0241 0.44 -0.3 273,136 - DvMF_0241 0.45 +0.0 273,268 + DvMF_0241 0.56 +1.6 273,359 - DvMF_0241 0.63 -1.9 273,720 + +0.1 273,747 + -0.9 273,787 + -0.3 273,893 - -0.1 274,090 + DvMF_0242 0.19 -1.6 274,264 + DvMF_0242 0.35 -2.8 274,269 + DvMF_0242 0.36 -0.7 274,344 - DvMF_0242 0.43 -1.9 274,390 + DvMF_0242 0.47 -2.0 274,437 + DvMF_0242 0.52 -2.1 274,469 + DvMF_0242 0.55 -3.0 274,469 + DvMF_0242 0.55 -3.1 274,477 - DvMF_0242 0.55 -2.7 274,508 - DvMF_0242 0.58 -1.0 274,592 + DvMF_0242 0.66 -2.3 274,594 - DvMF_0242 0.66 -2.4
Or see this region's nucleotide sequence