Experiment: 4 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0131 and DvMF_0132 are separated by 2 nucleotides DvMF_0132 and DvMF_0133 are separated by 127 nucleotides DvMF_0133 and DvMF_0134 are separated by 206 nucleotides DvMF_0134 and DvMF_0135 are separated by 113 nucleotides
DvMF_0131: DvMF_0131 - hypothetical protein (RefSeq), at 147,498 to 147,839
_0131
DvMF_0132: DvMF_0132 - metal-dependent phosphohydrolase HD region (RefSeq), at 147,842 to 148,711
_0132
DvMF_0133: DvMF_0133 - Methyltransferase type 11 (RefSeq), at 148,839 to 149,576
_0133
DvMF_0134: DvMF_0134 - hypothetical protein (RefSeq), at 149,783 to 150,322
_0134
DvMF_0135: DvMF_0135 - Haloacid dehalogenase domain protein hydrolase (RefSeq), at 150,436 to 151,254
_0135
Position (kb) 148
149
150 Strain fitness (log2 ratio) -1
0
1 at 147.882 kb on - strand at 148.010 kb on + strand, within DvMF_0132 at 148.019 kb on + strand, within DvMF_0132 at 148.048 kb on - strand, within DvMF_0132 at 148.073 kb on - strand, within DvMF_0132 at 148.275 kb on + strand, within DvMF_0132 at 148.364 kb on + strand, within DvMF_0132 at 148.372 kb on - strand, within DvMF_0132 at 148.818 kb on + strand at 148.894 kb on - strand at 149.743 kb on + strand at 149.845 kb on - strand, within DvMF_0134 at 149.935 kb on + strand, within DvMF_0134 at 149.942 kb on + strand, within DvMF_0134 at 149.943 kb on - strand, within DvMF_0134 at 150.050 kb on + strand, within DvMF_0134 at 150.215 kb on - strand, within DvMF_0134 at 150.362 kb on - strand at 150.410 kb on - strand at 150.426 kb on + strand at 150.545 kb on - strand, within DvMF_0135
Per-strain Table
Position Strand Gene LocusTag Fraction 4 days starvation 37C remove 147,882 - +1.0 148,010 + DvMF_0132 0.19 -1.1 148,019 + DvMF_0132 0.20 -1.0 148,048 - DvMF_0132 0.24 -0.4 148,073 - DvMF_0132 0.27 -1.7 148,275 + DvMF_0132 0.50 -0.4 148,364 + DvMF_0132 0.60 -0.6 148,372 - DvMF_0132 0.61 +0.5 148,818 + -0.6 148,894 - +0.5 149,743 + -0.3 149,845 - DvMF_0134 0.11 -0.3 149,935 + DvMF_0134 0.28 -0.5 149,942 + DvMF_0134 0.29 -0.9 149,943 - DvMF_0134 0.30 -0.6 150,050 + DvMF_0134 0.49 +1.0 150,215 - DvMF_0134 0.80 -1.0 150,362 - -0.4 150,410 - -0.2 150,426 + +1.1 150,545 - DvMF_0135 0.13 -1.1
Or see this region's nucleotide sequence