Experiment: 4 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0032 and DvMF_0033 are separated by 120 nucleotides DvMF_0033 and DvMF_0034 are separated by 333 nucleotides
DvMF_0032: DvMF_0032 - diguanylate cyclase (RefSeq), at 39,790 to 41,526
_0032
DvMF_0033: DvMF_0033 - no description, at 41,647 to 43,079
_0033
DvMF_0034: DvMF_0034 - RND efflux system, outer membrane lipoprotein, NodT family (RefSeq), at 43,413 to 45,029
_0034
Position (kb) 41
42
43
44 Strain fitness (log2 ratio) -2
-1
0
1 at 40.670 kb on - strand, within DvMF_0032 at 40.869 kb on - strand, within DvMF_0032 at 41.020 kb on - strand, within DvMF_0032 at 41.023 kb on + strand, within DvMF_0032 at 41.052 kb on - strand, within DvMF_0032 at 41.074 kb on + strand, within DvMF_0032 at 41.858 kb on - strand, within DvMF_0033 at 41.879 kb on + strand, within DvMF_0033 at 41.879 kb on + strand, within DvMF_0033 at 41.879 kb on + strand, within DvMF_0033 at 41.879 kb on + strand, within DvMF_0033 at 41.879 kb on + strand, within DvMF_0033 at 41.879 kb on + strand, within DvMF_0033 at 41.887 kb on - strand, within DvMF_0033 at 41.887 kb on - strand, within DvMF_0033 at 41.887 kb on - strand, within DvMF_0033 at 41.912 kb on - strand, within DvMF_0033 at 41.943 kb on - strand, within DvMF_0033 at 41.950 kb on - strand, within DvMF_0033 at 42.315 kb on - strand, within DvMF_0033 at 42.387 kb on + strand, within DvMF_0033 at 42.388 kb on + strand, within DvMF_0033 at 42.396 kb on - strand, within DvMF_0033 at 42.396 kb on - strand, within DvMF_0033 at 42.438 kb on - strand, within DvMF_0033 at 42.679 kb on - strand, within DvMF_0033 at 42.779 kb on - strand, within DvMF_0033 at 42.824 kb on + strand, within DvMF_0033 at 43.732 kb on - strand, within DvMF_0034 at 43.882 kb on - strand, within DvMF_0034 at 43.892 kb on - strand, within DvMF_0034 at 44.030 kb on + strand, within DvMF_0034 at 44.030 kb on - strand, within DvMF_0034 at 44.062 kb on - strand, within DvMF_0034
Per-strain Table
Position Strand Gene LocusTag Fraction 4 days starvation 37C remove 40,670 - DvMF_0032 0.51 +0.5 40,869 - DvMF_0032 0.62 -0.8 41,020 - DvMF_0032 0.71 +0.6 41,023 + DvMF_0032 0.71 -0.8 41,052 - DvMF_0032 0.73 -1.1 41,074 + DvMF_0032 0.74 -1.3 41,858 - DvMF_0033 0.15 -0.2 41,879 + DvMF_0033 0.16 +1.7 41,879 + DvMF_0033 0.16 -0.6 41,879 + DvMF_0033 0.16 +1.3 41,879 + DvMF_0033 0.16 +0.2 41,879 + DvMF_0033 0.16 -0.8 41,879 + DvMF_0033 0.16 +0.1 41,887 - DvMF_0033 0.17 -0.3 41,887 - DvMF_0033 0.17 -0.9 41,887 - DvMF_0033 0.17 +1.2 41,912 - DvMF_0033 0.18 -0.3 41,943 - DvMF_0033 0.21 -0.4 41,950 - DvMF_0033 0.21 -0.7 42,315 - DvMF_0033 0.47 -0.5 42,387 + DvMF_0033 0.52 -0.3 42,388 + DvMF_0033 0.52 -0.9 42,396 - DvMF_0033 0.52 -2.3 42,396 - DvMF_0033 0.52 +0.2 42,438 - DvMF_0033 0.55 -0.6 42,679 - DvMF_0033 0.72 -0.9 42,779 - DvMF_0033 0.79 +0.2 42,824 + DvMF_0033 0.82 -1.4 43,732 - DvMF_0034 0.20 +0.8 43,882 - DvMF_0034 0.29 -0.0 43,892 - DvMF_0034 0.30 -0.6 44,030 + DvMF_0034 0.38 -1.9 44,030 - DvMF_0034 0.38 +0.0 44,062 - DvMF_0034 0.40 -0.8
Or see this region's nucleotide sequence