Strain Fitness in Shewanella loihica PV-4 around Shew_3576

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,272,941	+				-0.1
4,272,942	+				+0.1
4,272,944	-				+0.2
4,272,948	+				-0.6
4,272,948	+				+0.0
4,272,949	+				+0.6
4,272,949	-				+0.0
4,272,950	-				+0.0
4,272,950	-				+0.1
4,272,950	-				-0.2
4,272,950	-				-0.1
4,272,950	-				-0.2
4,272,950	-				-0.6
4,272,950	-				-1.0
4,272,950	-				+0.2
4,272,950	-				-3.2
4,272,950	-				-0.2
4,272,950	-				+0.2
4,272,950	-				+0.2
4,272,956	-				-0.0
4,272,957	-				-0.1
4,272,957	-				-0.6
4,272,957	-				-0.8
4,272,984	+				-0.1
4,272,984	+				-0.1
4,272,984	+				+0.1
4,272,984	+				-0.5
4,272,984	+				+0.4
4,272,984	+				+0.1
4,272,984	+				+0.3
4,272,984	+				-0.2
4,272,984	+				+0.1
4,272,992	-				-0.0
4,272,992	-				+0.4
4,272,992	-				-0.0
4,272,992	-				-0.0
4,272,992	-				-0.0
4,272,992	-				-0.1
4,272,992	-				+1.5
4,272,992	-				+0.1
4,272,992	-				+0.2
4,272,992	-				+0.7
4,272,992	-				+0.1
4,272,992	-				+0.0
4,272,992	-				+0.8
4,272,992	-				+0.2
4,272,992	-				-0.4
4,272,998	-				-0.0
4,273,004	+				-0.2
4,273,012	-				+0.3
4,273,012	-				-0.0
4,273,042	+				-0.3
4,273,058	-				+0.1
4,273,068	+				+0.3
4,273,068	+				+1.5
4,273,068	+				+0.1
4,273,076	-				-0.0
4,273,076	-				+0.4
4,273,076	+				+0.4
4,273,076	+				+0.2
4,273,076	-				+0.3
4,273,084	-				+0.2
4,273,120	-				+0.1
4,273,132	+				+0.4
4,273,132	+				+0.3
4,273,132	+				-0.0
4,273,132	+				-0.0
4,273,132	+				-0.2
4,273,132	+				+0.0
4,273,132	+				+0.0
4,273,132	+				+0.1
4,273,145	+				+0.1
4,273,200	+				-0.1
4,273,208	-				-0.0
4,273,208	-				-0.0
4,273,223	-				+1.4
4,273,223	-				+0.2
4,273,223	-				-0.0
4,273,223	-				-0.0
4,273,223	-				+0.0
4,273,223	-				-0.3
4,273,223	-				+0.4
4,273,223	-				+0.1
4,273,223	-				-0.4
4,273,223	-				-0.9
4,273,223	-				-0.3
4,273,223	-				-0.6
4,273,223	-				-0.1
4,273,223	-				-0.0
4,273,223	-				+1.0
4,273,223	-				+0.0
4,273,223	-				+0.5
4,273,223	-				+0.0
4,273,223	-				+0.1
4,273,223	-				+0.4
4,273,223	-				+0.3
4,273,223	-				-0.1
4,273,223	-				-0.3
4,273,223	-				-0.1
4,273,223	-				-0.1
4,273,223	-				-0.6
4,273,223	-				+0.4
4,273,223	-				-0.5
4,273,223	-				-0.8
4,273,223	-				-0.7
4,273,223	-				+0.2
4,273,223	-				+0.7
4,273,270	+				+0.0
4,273,363	+				+0.3
4,273,568	+				-0.2
4,273,575	+				+0.3
4,273,673	+				-0.0
4,273,689	-				-0.1
4,273,712	-				-0.2
4,273,724	+				-0.1
4,273,730	-				+0.4
4,273,750	+				+0.1
4,274,032	-		Shew_3576	0.14	-0.5
4,274,037	-		Shew_3576	0.14	-0.1
4,274,076	+		Shew_3576	0.20	-0.0
4,274,126	+		Shew_3576	0.28	+0.4
4,274,182	+		Shew_3576	0.36	-0.2
4,274,281	+		Shew_3576	0.51	-0.8
4,274,315	-		Shew_3576	0.56	+0.2
4,274,383	-		Shew_3576	0.66	-0.6
4,274,383	-		Shew_3576	0.66	+0.1
4,274,486	-		Shew_3576	0.81	-1.3
4,274,530	+		Shew_3576	0.87	+0.1
4,274,632	-				+0.2
4,274,834	+				-0.0
4,274,836	+				+0.1
4,274,836	+				-0.2
4,274,844	-				+0.8
4,274,847	-				+0.2
4,275,307	+		Shew_3577	0.83	+0.2
4,275,315	-		Shew_3577	0.85	+0.3
4,275,315	-		Shew_3577	0.85	-0.3