Strain Fitness in Shewanella loihica PV-4 around Shew_3079

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,653,048	+		Shew_3078	0.42	+0.6
3,653,169	+		Shew_3078	0.50	+1.0
3,653,288	+		Shew_3078	0.58	+0.7
3,653,590	-		Shew_3078	0.77	-0.8
3,653,803	-				-0.8
3,654,378	+		Shew_3079	0.19	-3.6
3,654,413	+		Shew_3079	0.21	-0.1
3,654,421	-		Shew_3079	0.21	-0.2
3,654,427	+		Shew_3079	0.22	-0.8
3,654,826	+		Shew_3079	0.40	-0.2
3,654,859	+		Shew_3079	0.41	+0.3
3,654,976	+		Shew_3079	0.47	-0.0
3,655,013	-		Shew_3079	0.49	-0.3
3,655,128	+		Shew_3079	0.54	+0.0
3,655,136	-		Shew_3079	0.54	-0.2
3,655,301	-		Shew_3079	0.62	+0.1
3,655,301	-		Shew_3079	0.62	-0.2
3,656,148	+				-0.5
3,656,318	-				+0.0
3,656,436	+				-0.0
3,656,444	-				+0.1
3,656,489	+				+0.1
3,656,497	-				+0.0
3,656,673	+		Shew_3080	0.40	+0.2
3,656,703	+		Shew_3080	0.45	-0.0
3,656,885	-		Shew_3080	0.79	+0.2
3,656,891	-		Shew_3080	0.80	-0.1
3,656,891	-		Shew_3080	0.80	+0.4
3,656,906	-		Shew_3080	0.83	-1.0
3,656,941	-		Shew_3080	0.89	+2.3
3,657,031	+				+3.0