Strain Fitness in Shewanella loihica PV-4 around Shew_3024

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,590,259	+		Shew_3023	0.50	-0.1
3,590,267	-		Shew_3023	0.50	+0.1
3,590,402	-		Shew_3023	0.63	-0.0
3,590,402	-		Shew_3023	0.63	+0.1
3,590,669	+		Shew_3023	0.87	+0.4
3,590,683	+		Shew_3023	0.89	+0.2
3,590,693	+		Shew_3023	0.90	+0.2
3,590,849	+				-0.0
3,590,849	+				+0.1
3,591,040	+				+0.3
3,591,040	+				-0.0
3,591,048	-				-1.3
3,591,148	+		Shew_3024	0.12	-0.4
3,591,262	+		Shew_3024	0.19	+0.0
3,591,351	-		Shew_3024	0.24	-2.9
3,592,376	-		Shew_3024	0.86	-0.4
3,592,420	+		Shew_3024	0.88	-0.3
3,592,868	+		Shew_3025	0.13	+0.2
3,593,052	+		Shew_3025	0.25	-0.1
3,593,073	+		Shew_3025	0.27	+0.3
3,593,081	-		Shew_3025	0.27	+0.2
3,593,408	+		Shew_3025	0.49	-0.6
3,593,408	+		Shew_3025	0.49	+0.3