Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0074 and Shew_0075 overlap by 4 nucleotides Shew_0075 and Shew_0076 are separated by 292 nucleotides Shew_0076 and Shew_0077 are separated by 21 nucleotides
Shew_0074: Shew_0074 - no description, at 88,262 to 88,885
_0074
Shew_0075: Shew_0075 - hypothetical protein (RefSeq), at 88,882 to 89,097
_0075
Shew_0076: Shew_0076 - antibiotic biosynthesis monooxygenase (RefSeq), at 89,390 to 89,677
_0076
Shew_0077: Shew_0077 - GCN5-related N-acetyltransferase (RefSeq), at 89,699 to 90,652
_0077
Position (kb) 89
90 Strain fitness (log2 ratio) -1
0
1 at 88.526 kb on + strand, within Shew_0074 at 88.665 kb on + strand, within Shew_0074 at 88.665 kb on + strand, within Shew_0074 at 88.673 kb on - strand, within Shew_0074 at 88.673 kb on - strand, within Shew_0074 at 88.673 kb on - strand, within Shew_0074 at 88.673 kb on - strand, within Shew_0074 at 88.755 kb on + strand, within Shew_0074 at 88.847 kb on + strand at 89.081 kb on - strand at 89.113 kb on - strand at 89.291 kb on + strand at 89.299 kb on - strand at 89.531 kb on + strand, within Shew_0076 at 89.567 kb on + strand, within Shew_0076 at 89.572 kb on + strand, within Shew_0076 at 89.671 kb on + strand at 89.671 kb on + strand at 89.671 kb on + strand at 89.840 kb on - strand, within Shew_0077 at 89.909 kb on + strand, within Shew_0077 at 89.975 kb on + strand, within Shew_0077 at 90.001 kb on + strand, within Shew_0077 at 90.009 kb on - strand, within Shew_0077 at 90.107 kb on + strand, within Shew_0077 at 90.107 kb on + strand, within Shew_0077 at 90.115 kb on - strand, within Shew_0077 at 90.115 kb on - strand, within Shew_0077 at 90.198 kb on + strand, within Shew_0077 at 90.441 kb on + strand, within Shew_0077 at 90.496 kb on - strand, within Shew_0077 at 90.500 kb on + strand, within Shew_0077
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 88,526 + Shew_0074 0.42 +0.1 88,665 + Shew_0074 0.65 -0.4 88,665 + Shew_0074 0.65 -0.2 88,673 - Shew_0074 0.66 +0.8 88,673 - Shew_0074 0.66 +0.3 88,673 - Shew_0074 0.66 +0.1 88,673 - Shew_0074 0.66 +0.7 88,755 + Shew_0074 0.79 +0.3 88,847 + -0.9 89,081 - +0.0 89,113 - -0.2 89,291 + +0.3 89,299 - +0.2 89,531 + Shew_0076 0.49 -0.3 89,567 + Shew_0076 0.61 -0.2 89,572 + Shew_0076 0.63 -0.2 89,671 + -0.1 89,671 + +0.1 89,671 + +0.0 89,840 - Shew_0077 0.15 +0.1 89,909 + Shew_0077 0.22 -0.1 89,975 + Shew_0077 0.29 +0.1 90,001 + Shew_0077 0.32 -0.1 90,009 - Shew_0077 0.32 +0.3 90,107 + Shew_0077 0.43 +0.1 90,107 + Shew_0077 0.43 +0.1 90,115 - Shew_0077 0.44 -0.2 90,115 - Shew_0077 0.44 +0.0 90,198 + Shew_0077 0.52 +0.1 90,441 + Shew_0077 0.78 +0.3 90,496 - Shew_0077 0.84 +0.0 90,500 + Shew_0077 0.84 -0.3
Or see this region's nucleotide sequence