Experiment: H2 N-free with 2mM Adenosine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMJJ_RS00780 and MMJJ_RS00785 are separated by 28 nucleotides MMJJ_RS00785 and MMJJ_RS00790 are separated by 132 nucleotides MMJJ_RS00790 and MMJJ_RS00795 are separated by 14 nucleotides MMJJ_RS00795 and MMJJ_RS00800 are separated by 220 nucleotides
MMJJ_RS00780: MMJJ_RS00780 - M48 family metallopeptidase, at 148,441 to 149,109
_RS00780
MMJJ_RS00785: MMJJ_RS00785 - hypothetical protein, at 149,138 to 149,329
_RS00785
MMJJ_RS00790: MMJJ_RS00790 - ribonuclease H family protein, at 149,462 to 150,067
_RS00790
MMJJ_RS00795: MMJJ_RS00795 - 2-hydroxyacyl-CoA dehydratase family protein, at 150,082 to 151,203
_RS00795
MMJJ_RS00800: MMJJ_RS00800 - MFS transporter, at 151,424 to 152,728
_RS00800
Position (kb) 150
151
152 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5 at 149.105 kb on + strand at 149.171 kb on - strand, within MMJJ_RS00785 at 149.290 kb on - strand, within MMJJ_RS00785 at 149.291 kb on + strand, within MMJJ_RS00785 at 149.352 kb on + strand at 149.356 kb on - strand at 149.395 kb on + strand at 149.399 kb on - strand at 149.400 kb on + strand at 149.412 kb on + strand at 149.418 kb on + strand at 149.426 kb on - strand at 149.426 kb on - strand at 149.426 kb on - strand at 149.426 kb on - strand at 149.427 kb on + strand at 149.427 kb on + strand at 149.428 kb on - strand at 149.428 kb on - strand at 149.429 kb on + strand at 149.429 kb on + strand at 149.429 kb on + strand at 149.430 kb on - strand at 149.430 kb on - strand at 149.430 kb on - strand at 149.431 kb on + strand at 149.431 kb on + strand at 149.431 kb on + strand at 149.431 kb on + strand at 149.473 kb on + strand at 149.473 kb on + strand at 149.474 kb on - strand at 149.475 kb on + strand at 149.475 kb on + strand at 149.573 kb on + strand, within MMJJ_RS00790 at 149.597 kb on - strand, within MMJJ_RS00790 at 149.601 kb on - strand, within MMJJ_RS00790 at 149.629 kb on - strand, within MMJJ_RS00790 at 149.634 kb on - strand, within MMJJ_RS00790 at 149.702 kb on + strand, within MMJJ_RS00790 at 149.709 kb on + strand, within MMJJ_RS00790 at 149.730 kb on - strand, within MMJJ_RS00790 at 149.731 kb on + strand, within MMJJ_RS00790 at 149.756 kb on + strand, within MMJJ_RS00790 at 149.871 kb on - strand, within MMJJ_RS00790 at 149.871 kb on - strand, within MMJJ_RS00790 at 149.873 kb on - strand, within MMJJ_RS00790 at 149.945 kb on - strand, within MMJJ_RS00790 at 149.948 kb on + strand, within MMJJ_RS00790 at 149.966 kb on - strand, within MMJJ_RS00790 at 150.019 kb on - strand at 150.040 kb on - strand at 150.041 kb on + strand at 150.041 kb on + strand at 150.074 kb on + strand at 150.079 kb on + strand at 150.118 kb on - strand at 150.159 kb on - strand at 150.160 kb on + strand at 150.160 kb on + strand at 150.200 kb on + strand, within MMJJ_RS00795 at 150.216 kb on - strand, within MMJJ_RS00795 at 150.217 kb on + strand, within MMJJ_RS00795 at 150.230 kb on - strand, within MMJJ_RS00795 at 150.231 kb on + strand, within MMJJ_RS00795 at 150.235 kb on - strand, within MMJJ_RS00795 at 150.236 kb on + strand, within MMJJ_RS00795 at 150.236 kb on + strand, within MMJJ_RS00795 at 150.236 kb on + strand, within MMJJ_RS00795 at 150.240 kb on - strand, within MMJJ_RS00795 at 150.240 kb on - strand, within MMJJ_RS00795 at 150.240 kb on - strand, within MMJJ_RS00795 at 150.240 kb on - strand, within MMJJ_RS00795 at 150.240 kb on - strand, within MMJJ_RS00795 at 150.241 kb on + strand, within MMJJ_RS00795 at 150.241 kb on + strand, within MMJJ_RS00795 at 150.241 kb on + strand, within MMJJ_RS00795 at 150.241 kb on + strand, within MMJJ_RS00795 at 150.241 kb on + strand, within MMJJ_RS00795 at 150.242 kb on - strand, within MMJJ_RS00795 at 150.242 kb on - strand, within MMJJ_RS00795 at 150.243 kb on + strand, within MMJJ_RS00795 at 150.243 kb on + strand, within MMJJ_RS00795 at 150.246 kb on + strand, within MMJJ_RS00795 at 150.246 kb on + strand, within MMJJ_RS00795 at 150.275 kb on + strand, within MMJJ_RS00795 at 150.285 kb on - strand, within MMJJ_RS00795 at 150.336 kb on - strand, within MMJJ_RS00795 at 150.405 kb on - strand, within MMJJ_RS00795 at 150.406 kb on + strand, within MMJJ_RS00795 at 150.406 kb on + strand, within MMJJ_RS00795 at 150.556 kb on - strand, within MMJJ_RS00795 at 150.580 kb on + strand, within MMJJ_RS00795 at 150.580 kb on + strand, within MMJJ_RS00795 at 150.580 kb on + strand, within MMJJ_RS00795 at 150.580 kb on + strand, within MMJJ_RS00795 at 150.580 kb on + strand, within MMJJ_RS00795 at 150.587 kb on + strand, within MMJJ_RS00795 at 150.587 kb on + strand, within MMJJ_RS00795 at 150.637 kb on - strand, within MMJJ_RS00795 at 150.669 kb on + strand, within MMJJ_RS00795 at 150.685 kb on - strand, within MMJJ_RS00795 at 150.722 kb on + strand, within MMJJ_RS00795 at 150.764 kb on - strand, within MMJJ_RS00795 at 150.764 kb on - strand, within MMJJ_RS00795 at 150.765 kb on + strand, within MMJJ_RS00795 at 150.801 kb on - strand, within MMJJ_RS00795 at 150.801 kb on - strand, within MMJJ_RS00795 at 150.801 kb on - strand, within MMJJ_RS00795 at 150.801 kb on - strand, within MMJJ_RS00795 at 150.801 kb on - strand, within MMJJ_RS00795 at 150.802 kb on + strand, within MMJJ_RS00795 at 150.802 kb on + strand, within MMJJ_RS00795 at 150.843 kb on + strand, within MMJJ_RS00795 at 150.912 kb on - strand, within MMJJ_RS00795 at 150.963 kb on + strand, within MMJJ_RS00795 at 150.987 kb on - strand, within MMJJ_RS00795 at 150.987 kb on - strand, within MMJJ_RS00795 at 150.987 kb on - strand, within MMJJ_RS00795 at 150.988 kb on + strand, within MMJJ_RS00795 at 151.072 kb on - strand, within MMJJ_RS00795 at 151.072 kb on - strand, within MMJJ_RS00795 at 151.074 kb on - strand, within MMJJ_RS00795 at 151.074 kb on - strand, within MMJJ_RS00795 at 151.075 kb on + strand, within MMJJ_RS00795 at 151.112 kb on + strand at 151.141 kb on - strand at 151.141 kb on - strand at 151.142 kb on + strand at 151.185 kb on - strand at 151.226 kb on + strand at 151.226 kb on + strand at 151.226 kb on + strand at 151.231 kb on + strand at 151.238 kb on + strand at 151.238 kb on + strand at 151.246 kb on + strand at 151.340 kb on + strand at 151.397 kb on + strand at 151.397 kb on + strand at 151.403 kb on - strand at 151.421 kb on - strand at 151.421 kb on - strand at 151.421 kb on - strand at 151.422 kb on + strand at 151.422 kb on + strand at 151.422 kb on + strand at 151.422 kb on + strand at 151.428 kb on - strand at 151.460 kb on - strand at 151.492 kb on + strand at 151.508 kb on - strand at 151.521 kb on - strand at 151.522 kb on + strand at 151.535 kb on + strand at 151.535 kb on + strand at 151.535 kb on + strand at 151.550 kb on + strand at 151.550 kb on + strand at 151.607 kb on - strand, within MMJJ_RS00800 at 151.607 kb on - strand, within MMJJ_RS00800 at 151.613 kb on - strand, within MMJJ_RS00800 at 151.613 kb on - strand, within MMJJ_RS00800 at 151.613 kb on - strand, within MMJJ_RS00800 at 151.614 kb on + strand, within MMJJ_RS00800 at 151.614 kb on + strand, within MMJJ_RS00800 at 151.614 kb on + strand, within MMJJ_RS00800 at 151.621 kb on + strand, within MMJJ_RS00800 at 151.745 kb on + strand, within MMJJ_RS00800 at 151.745 kb on + strand, within MMJJ_RS00800 at 151.745 kb on + strand, within MMJJ_RS00800 at 151.747 kb on + strand, within MMJJ_RS00800 at 151.762 kb on + strand, within MMJJ_RS00800 at 151.776 kb on - strand, within MMJJ_RS00800 at 151.787 kb on - strand, within MMJJ_RS00800 at 151.787 kb on - strand, within MMJJ_RS00800 at 151.787 kb on - strand, within MMJJ_RS00800 at 151.788 kb on + strand, within MMJJ_RS00800 at 151.788 kb on + strand, within MMJJ_RS00800 at 151.788 kb on + strand, within MMJJ_RS00800 at 151.788 kb on + strand, within MMJJ_RS00800 at 151.788 kb on + strand, within MMJJ_RS00800 at 151.908 kb on + strand, within MMJJ_RS00800 at 151.913 kb on + strand, within MMJJ_RS00800 at 151.915 kb on - strand, within MMJJ_RS00800 at 151.915 kb on - strand, within MMJJ_RS00800 at 151.915 kb on - strand, within MMJJ_RS00800 at 151.915 kb on - strand, within MMJJ_RS00800 at 151.916 kb on + strand, within MMJJ_RS00800 at 151.916 kb on + strand, within MMJJ_RS00800 at 151.916 kb on + strand, within MMJJ_RS00800 at 151.916 kb on + strand, within MMJJ_RS00800 at 151.923 kb on - strand, within MMJJ_RS00800 at 151.924 kb on + strand, within MMJJ_RS00800 at 151.924 kb on + strand, within MMJJ_RS00800 at 151.938 kb on - strand, within MMJJ_RS00800 at 151.938 kb on - strand, within MMJJ_RS00800 at 151.957 kb on + strand, within MMJJ_RS00800 at 151.985 kb on - strand, within MMJJ_RS00800 at 151.986 kb on + strand, within MMJJ_RS00800 at 151.986 kb on + strand, within MMJJ_RS00800 at 151.987 kb on - strand, within MMJJ_RS00800 at 151.987 kb on - strand, within MMJJ_RS00800 at 151.987 kb on - strand, within MMJJ_RS00800 at 151.987 kb on - strand, within MMJJ_RS00800 at 151.988 kb on + strand, within MMJJ_RS00800 at 151.988 kb on + strand, within MMJJ_RS00800 at 151.988 kb on + strand, within MMJJ_RS00800 at 151.988 kb on + strand, within MMJJ_RS00800 at 151.988 kb on + strand, within MMJJ_RS00800 at 151.988 kb on + strand, within MMJJ_RS00800 at 151.994 kb on + strand, within MMJJ_RS00800 at 152.097 kb on - strand, within MMJJ_RS00800 at 152.098 kb on + strand, within MMJJ_RS00800 at 152.098 kb on + strand, within MMJJ_RS00800 at 152.098 kb on + strand, within MMJJ_RS00800 at 152.101 kb on - strand, within MMJJ_RS00800 at 152.101 kb on - strand, within MMJJ_RS00800 at 152.101 kb on - strand, within MMJJ_RS00800 at 152.113 kb on - strand, within MMJJ_RS00800 at 152.116 kb on - strand, within MMJJ_RS00800 at 152.116 kb on - strand, within MMJJ_RS00800 at 152.117 kb on + strand, within MMJJ_RS00800 at 152.157 kb on - strand, within MMJJ_RS00800 at 152.158 kb on + strand, within MMJJ_RS00800 at 152.171 kb on - strand, within MMJJ_RS00800 at 152.172 kb on + strand, within MMJJ_RS00800 at 152.174 kb on - strand, within MMJJ_RS00800 at 152.175 kb on + strand, within MMJJ_RS00800 at 152.175 kb on + strand, within MMJJ_RS00800 at 152.175 kb on + strand, within MMJJ_RS00800 at 152.193 kb on + strand, within MMJJ_RS00800
Per-strain Table
Position Strand Gene LocusTag Fraction H2 N-free with 2mM Adenosine remove 149,105 + +1.0 149,171 - MMJJ_RS00785 0.17 +0.2 149,290 - MMJJ_RS00785 0.79 +1.7 149,291 + MMJJ_RS00785 0.80 +0.5 149,352 + -1.9 149,356 - -1.3 149,395 + -0.4 149,399 - -0.1 149,400 + +1.2 149,412 + +0.4 149,418 + -1.8 149,426 - -0.9 149,426 - +2.5 149,426 - +0.3 149,426 - -1.4 149,427 + +0.6 149,427 + -0.7 149,428 - -1.6 149,428 - +0.0 149,429 + +1.9 149,429 + +0.7 149,429 + -0.5 149,430 - +0.0 149,430 - +0.0 149,430 - -2.7 149,431 + -0.4 149,431 + -2.0 149,431 + -1.1 149,431 + -1.0 149,473 + -0.6 149,473 + -3.0 149,474 - -0.4 149,475 + -0.8 149,475 + -1.8 149,573 + MMJJ_RS00790 0.18 -0.3 149,597 - MMJJ_RS00790 0.22 -1.8 149,601 - MMJJ_RS00790 0.23 +2.3 149,629 - MMJJ_RS00790 0.28 -3.4 149,634 - MMJJ_RS00790 0.28 -0.7 149,702 + MMJJ_RS00790 0.40 +0.8 149,709 + MMJJ_RS00790 0.41 +0.2 149,730 - MMJJ_RS00790 0.44 -0.2 149,731 + MMJJ_RS00790 0.44 -3.0 149,756 + MMJJ_RS00790 0.49 -1.5 149,871 - MMJJ_RS00790 0.67 +0.2 149,871 - MMJJ_RS00790 0.67 -0.5 149,873 - MMJJ_RS00790 0.68 -0.1 149,945 - MMJJ_RS00790 0.80 -2.3 149,948 + MMJJ_RS00790 0.80 -0.5 149,966 - MMJJ_RS00790 0.83 -1.3 150,019 - -0.2 150,040 - -2.5 150,041 + +0.7 150,041 + -3.8 150,074 + -1.7 150,079 + +5.2 150,118 - +3.2 150,159 - +0.5 150,160 + +0.7 150,160 + -2.9 150,200 + MMJJ_RS00795 0.11 +0.8 150,216 - MMJJ_RS00795 0.12 -0.1 150,217 + MMJJ_RS00795 0.12 +0.4 150,230 - MMJJ_RS00795 0.13 -1.6 150,231 + MMJJ_RS00795 0.13 -1.7 150,235 - MMJJ_RS00795 0.14 -0.0 150,236 + MMJJ_RS00795 0.14 +1.0 150,236 + MMJJ_RS00795 0.14 +1.0 150,236 + MMJJ_RS00795 0.14 +1.3 150,240 - MMJJ_RS00795 0.14 -1.1 150,240 - MMJJ_RS00795 0.14 +0.2 150,240 - MMJJ_RS00795 0.14 -0.5 150,240 - MMJJ_RS00795 0.14 -2.5 150,240 - MMJJ_RS00795 0.14 -0.3 150,241 + MMJJ_RS00795 0.14 -2.3 150,241 + MMJJ_RS00795 0.14 +0.2 150,241 + MMJJ_RS00795 0.14 -0.6 150,241 + MMJJ_RS00795 0.14 +1.3 150,241 + MMJJ_RS00795 0.14 -0.2 150,242 - MMJJ_RS00795 0.14 -0.9 150,242 - MMJJ_RS00795 0.14 -2.5 150,243 + MMJJ_RS00795 0.14 +0.7 150,243 + MMJJ_RS00795 0.14 +0.5 150,246 + MMJJ_RS00795 0.15 +0.8 150,246 + MMJJ_RS00795 0.15 -1.7 150,275 + MMJJ_RS00795 0.17 -0.8 150,285 - MMJJ_RS00795 0.18 -2.8 150,336 - MMJJ_RS00795 0.23 +0.9 150,405 - MMJJ_RS00795 0.29 -2.1 150,406 + MMJJ_RS00795 0.29 +0.2 150,406 + MMJJ_RS00795 0.29 -0.3 150,556 - MMJJ_RS00795 0.42 -3.1 150,580 + MMJJ_RS00795 0.44 -0.3 150,580 + MMJJ_RS00795 0.44 +0.5 150,580 + MMJJ_RS00795 0.44 -2.2 150,580 + MMJJ_RS00795 0.44 -1.5 150,580 + MMJJ_RS00795 0.44 -1.1 150,587 + MMJJ_RS00795 0.45 +1.2 150,587 + MMJJ_RS00795 0.45 +0.9 150,637 - MMJJ_RS00795 0.49 -1.1 150,669 + MMJJ_RS00795 0.52 +0.6 150,685 - MMJJ_RS00795 0.54 -1.7 150,722 + MMJJ_RS00795 0.57 -0.7 150,764 - MMJJ_RS00795 0.61 -0.6 150,764 - MMJJ_RS00795 0.61 +0.9 150,765 + MMJJ_RS00795 0.61 -0.5 150,801 - MMJJ_RS00795 0.64 -0.4 150,801 - MMJJ_RS00795 0.64 -1.1 150,801 - MMJJ_RS00795 0.64 -1.6 150,801 - MMJJ_RS00795 0.64 +1.3 150,801 - MMJJ_RS00795 0.64 +0.9 150,802 + MMJJ_RS00795 0.64 +0.3 150,802 + MMJJ_RS00795 0.64 -0.7 150,843 + MMJJ_RS00795 0.68 -1.5 150,912 - MMJJ_RS00795 0.74 -0.8 150,963 + MMJJ_RS00795 0.79 -0.3 150,987 - MMJJ_RS00795 0.81 -1.3 150,987 - MMJJ_RS00795 0.81 +0.5 150,987 - MMJJ_RS00795 0.81 -4.4 150,988 + MMJJ_RS00795 0.81 -0.7 151,072 - MMJJ_RS00795 0.88 -0.2 151,072 - MMJJ_RS00795 0.88 +3.5 151,074 - MMJJ_RS00795 0.88 -0.6 151,074 - MMJJ_RS00795 0.88 +0.3 151,075 + MMJJ_RS00795 0.89 -1.1 151,112 + +0.2 151,141 - -1.7 151,141 - +0.6 151,142 + -1.0 151,185 - +0.6 151,226 + -0.7 151,226 + +0.9 151,226 + -0.5 151,231 + -0.7 151,238 + +0.6 151,238 + +1.4 151,246 + +0.8 151,340 + +1.3 151,397 + -0.2 151,397 + -0.4 151,403 - +1.0 151,421 - +0.3 151,421 - -1.0 151,421 - -0.1 151,422 + -0.1 151,422 + -0.1 151,422 + -0.8 151,422 + +0.9 151,428 - +1.3 151,460 - -2.3 151,492 + -0.1 151,508 - +0.4 151,521 - +0.2 151,522 + -1.8 151,535 + -0.4 151,535 + +0.5 151,535 + +1.0 151,550 + +1.5 151,550 + -0.2 151,607 - MMJJ_RS00800 0.14 +1.5 151,607 - MMJJ_RS00800 0.14 -0.3 151,613 - MMJJ_RS00800 0.14 -0.5 151,613 - MMJJ_RS00800 0.14 +0.0 151,613 - MMJJ_RS00800 0.14 +0.3 151,614 + MMJJ_RS00800 0.15 -0.5 151,614 + MMJJ_RS00800 0.15 -0.4 151,614 + MMJJ_RS00800 0.15 -0.2 151,621 + MMJJ_RS00800 0.15 -0.1 151,745 + MMJJ_RS00800 0.25 -0.4 151,745 + MMJJ_RS00800 0.25 -0.5 151,745 + MMJJ_RS00800 0.25 -1.0 151,747 + MMJJ_RS00800 0.25 +1.5 151,762 + MMJJ_RS00800 0.26 -0.7 151,776 - MMJJ_RS00800 0.27 +0.5 151,787 - MMJJ_RS00800 0.28 +1.5 151,787 - MMJJ_RS00800 0.28 -1.3 151,787 - MMJJ_RS00800 0.28 +0.7 151,788 + MMJJ_RS00800 0.28 +1.0 151,788 + MMJJ_RS00800 0.28 +1.4 151,788 + MMJJ_RS00800 0.28 -2.3 151,788 + MMJJ_RS00800 0.28 +1.6 151,788 + MMJJ_RS00800 0.28 -0.8 151,908 + MMJJ_RS00800 0.37 -0.5 151,913 + MMJJ_RS00800 0.37 +0.4 151,915 - MMJJ_RS00800 0.38 +0.2 151,915 - MMJJ_RS00800 0.38 +1.5 151,915 - MMJJ_RS00800 0.38 -0.8 151,915 - MMJJ_RS00800 0.38 -0.8 151,916 + MMJJ_RS00800 0.38 -1.3 151,916 + MMJJ_RS00800 0.38 -1.3 151,916 + MMJJ_RS00800 0.38 -0.7 151,916 + MMJJ_RS00800 0.38 -1.3 151,923 - MMJJ_RS00800 0.38 +1.1 151,924 + MMJJ_RS00800 0.38 +0.2 151,924 + MMJJ_RS00800 0.38 -1.7 151,938 - MMJJ_RS00800 0.39 -1.4 151,938 - MMJJ_RS00800 0.39 -1.5 151,957 + MMJJ_RS00800 0.41 +1.1 151,985 - MMJJ_RS00800 0.43 -2.5 151,986 + MMJJ_RS00800 0.43 -1.7 151,986 + MMJJ_RS00800 0.43 +1.4 151,987 - MMJJ_RS00800 0.43 -0.2 151,987 - MMJJ_RS00800 0.43 +0.5 151,987 - MMJJ_RS00800 0.43 -0.7 151,987 - MMJJ_RS00800 0.43 -1.6 151,988 + MMJJ_RS00800 0.43 -0.4 151,988 + MMJJ_RS00800 0.43 +1.0 151,988 + MMJJ_RS00800 0.43 -1.9 151,988 + MMJJ_RS00800 0.43 +0.7 151,988 + MMJJ_RS00800 0.43 -0.3 151,988 + MMJJ_RS00800 0.43 -2.0 151,994 + MMJJ_RS00800 0.44 -0.8 152,097 - MMJJ_RS00800 0.52 +0.8 152,098 + MMJJ_RS00800 0.52 +1.3 152,098 + MMJJ_RS00800 0.52 +1.6 152,098 + MMJJ_RS00800 0.52 -0.7 152,101 - MMJJ_RS00800 0.52 +0.2 152,101 - MMJJ_RS00800 0.52 +1.9 152,101 - MMJJ_RS00800 0.52 -1.2 152,113 - MMJJ_RS00800 0.53 -2.5 152,116 - MMJJ_RS00800 0.53 +1.8 152,116 - MMJJ_RS00800 0.53 +0.1 152,117 + MMJJ_RS00800 0.53 -0.6 152,157 - MMJJ_RS00800 0.56 -0.7 152,158 + MMJJ_RS00800 0.56 -1.5 152,171 - MMJJ_RS00800 0.57 -0.2 152,172 + MMJJ_RS00800 0.57 +1.3 152,174 - MMJJ_RS00800 0.57 +0.5 152,175 + MMJJ_RS00800 0.58 +0.2 152,175 + MMJJ_RS00800 0.58 +1.5 152,175 + MMJJ_RS00800 0.58 +1.1 152,193 + MMJJ_RS00800 0.59 +1.3
Or see this region's nucleotide sequence