Experiment: Paraquat dichloride 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS32375 and AZOBR_RS32380 are separated by 6 nucleotides AZOBR_RS32380 and AZOBR_RS32385 are separated by 147 nucleotides
AZOBR_RS32375: AZOBR_RS32375 - hypothetical protein, at 629,239 to 630,351
_RS32375
AZOBR_RS32380: AZOBR_RS32380 - hypothetical protein, at 630,358 to 632,478
_RS32380
AZOBR_RS32385: AZOBR_RS32385 - FAD-dependent oxidoreductase, at 632,626 to 633,930
_RS32385
Position (kb) 630
631
632
633 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 629.373 kb on + strand, within AZOBR_RS32375 at 629.373 kb on + strand, within AZOBR_RS32375 at 629.569 kb on + strand, within AZOBR_RS32375 at 629.806 kb on + strand, within AZOBR_RS32375 at 630.212 kb on - strand, within AZOBR_RS32375 at 630.212 kb on - strand, within AZOBR_RS32375 at 630.212 kb on - strand, within AZOBR_RS32375 at 630.223 kb on + strand, within AZOBR_RS32375 at 630.223 kb on + strand, within AZOBR_RS32375 at 630.223 kb on + strand, within AZOBR_RS32375 at 630.331 kb on + strand at 630.331 kb on + strand at 630.629 kb on + strand, within AZOBR_RS32380 at 630.630 kb on - strand, within AZOBR_RS32380 at 630.630 kb on - strand, within AZOBR_RS32380 at 630.680 kb on + strand, within AZOBR_RS32380 at 630.681 kb on - strand, within AZOBR_RS32380 at 630.881 kb on + strand, within AZOBR_RS32380 at 630.881 kb on + strand, within AZOBR_RS32380 at 631.004 kb on + strand, within AZOBR_RS32380 at 631.005 kb on - strand, within AZOBR_RS32380 at 632.072 kb on + strand, within AZOBR_RS32380 at 632.400 kb on - strand at 632.585 kb on - strand at 632.663 kb on + strand at 632.664 kb on - strand at 632.664 kb on - strand at 632.664 kb on - strand at 632.814 kb on - strand, within AZOBR_RS32385 at 632.814 kb on - strand, within AZOBR_RS32385 at 633.188 kb on + strand, within AZOBR_RS32385 at 633.189 kb on - strand, within AZOBR_RS32385 at 633.405 kb on + strand, within AZOBR_RS32385
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.04 mg/ml remove 629,373 + AZOBR_RS32375 0.12 -0.2 629,373 + AZOBR_RS32375 0.12 +0.8 629,569 + AZOBR_RS32375 0.30 -1.3 629,806 + AZOBR_RS32375 0.51 -0.5 630,212 - AZOBR_RS32375 0.87 +0.6 630,212 - AZOBR_RS32375 0.87 +0.0 630,212 - AZOBR_RS32375 0.87 +1.2 630,223 + AZOBR_RS32375 0.88 +1.0 630,223 + AZOBR_RS32375 0.88 -0.4 630,223 + AZOBR_RS32375 0.88 +0.1 630,331 + -2.8 630,331 + +0.6 630,629 + AZOBR_RS32380 0.13 +1.2 630,630 - AZOBR_RS32380 0.13 -0.9 630,630 - AZOBR_RS32380 0.13 -0.4 630,680 + AZOBR_RS32380 0.15 +0.7 630,681 - AZOBR_RS32380 0.15 +0.8 630,881 + AZOBR_RS32380 0.25 +0.4 630,881 + AZOBR_RS32380 0.25 -0.9 631,004 + AZOBR_RS32380 0.30 -1.3 631,005 - AZOBR_RS32380 0.31 -1.1 632,072 + AZOBR_RS32380 0.81 +1.2 632,400 - -0.3 632,585 - -1.2 632,663 + -3.1 632,664 - -1.6 632,664 - +0.5 632,664 - -0.2 632,814 - AZOBR_RS32385 0.14 +1.3 632,814 - AZOBR_RS32385 0.14 -0.1 633,188 + AZOBR_RS32385 0.43 +0.6 633,189 - AZOBR_RS32385 0.43 -0.9 633,405 + AZOBR_RS32385 0.60 +1.2
Or see this region's nucleotide sequence