Experiment: Paraquat dichloride 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS30615 and AZOBR_RS30620 are separated by 484 nucleotides AZOBR_RS30620 and AZOBR_RS30625 are separated by 5 nucleotides AZOBR_RS30625 and AZOBR_RS30630 are separated by 133 nucleotides
AZOBR_RS30615: AZOBR_RS30615 - acetoacetyl-CoA reductase, at 225,184 to 225,906
_RS30615
AZOBR_RS30620: AZOBR_RS30620 - hypothetical protein, at 226,391 to 226,792
_RS30620
AZOBR_RS30625: AZOBR_RS30625 - MFS transporter, at 226,798 to 228,033
_RS30625
AZOBR_RS30630: AZOBR_RS30630 - transcriptional regulator, at 228,167 to 229,102
_RS30630
Position (kb) 226
227
228
229 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 225.901 kb on + strand at 225.901 kb on + strand at 225.902 kb on - strand at 225.902 kb on - strand at 226.315 kb on + strand at 226.316 kb on - strand at 227.006 kb on + strand, within AZOBR_RS30625 at 227.007 kb on - strand, within AZOBR_RS30625 at 227.087 kb on + strand, within AZOBR_RS30625 at 227.088 kb on - strand, within AZOBR_RS30625 at 227.088 kb on - strand, within AZOBR_RS30625 at 227.156 kb on + strand, within AZOBR_RS30625 at 227.157 kb on - strand, within AZOBR_RS30625 at 227.157 kb on - strand, within AZOBR_RS30625 at 227.157 kb on - strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.214 kb on - strand, within AZOBR_RS30625 at 227.214 kb on - strand, within AZOBR_RS30625 at 227.214 kb on - strand, within AZOBR_RS30625 at 227.214 kb on - strand, within AZOBR_RS30625 at 227.295 kb on - strand, within AZOBR_RS30625 at 227.366 kb on + strand, within AZOBR_RS30625 at 227.366 kb on + strand, within AZOBR_RS30625 at 227.367 kb on - strand, within AZOBR_RS30625 at 227.367 kb on - strand, within AZOBR_RS30625 at 228.122 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.04 mg/ml remove 225,901 + -0.1 225,901 + -0.0 225,902 - +0.7 225,902 - -0.4 226,315 + -0.1 226,316 - +2.2 227,006 + AZOBR_RS30625 0.17 +0.4 227,007 - AZOBR_RS30625 0.17 +0.5 227,087 + AZOBR_RS30625 0.23 +2.6 227,088 - AZOBR_RS30625 0.23 +0.1 227,088 - AZOBR_RS30625 0.23 -0.4 227,156 + AZOBR_RS30625 0.29 -0.7 227,157 - AZOBR_RS30625 0.29 +0.0 227,157 - AZOBR_RS30625 0.29 -1.8 227,157 - AZOBR_RS30625 0.29 +0.8 227,213 + AZOBR_RS30625 0.34 +1.5 227,213 + AZOBR_RS30625 0.34 +0.8 227,213 + AZOBR_RS30625 0.34 -1.7 227,213 + AZOBR_RS30625 0.34 -0.4 227,213 + AZOBR_RS30625 0.34 +0.3 227,213 + AZOBR_RS30625 0.34 +1.1 227,213 + AZOBR_RS30625 0.34 -0.7 227,213 + AZOBR_RS30625 0.34 -0.6 227,213 + AZOBR_RS30625 0.34 +0.7 227,213 + AZOBR_RS30625 0.34 +0.3 227,213 + AZOBR_RS30625 0.34 -0.5 227,214 - AZOBR_RS30625 0.34 -0.4 227,214 - AZOBR_RS30625 0.34 -2.8 227,214 - AZOBR_RS30625 0.34 -0.1 227,214 - AZOBR_RS30625 0.34 +1.7 227,295 - AZOBR_RS30625 0.40 -0.3 227,366 + AZOBR_RS30625 0.46 +0.5 227,366 + AZOBR_RS30625 0.46 -1.1 227,367 - AZOBR_RS30625 0.46 -1.0 227,367 - AZOBR_RS30625 0.46 -1.5 228,122 + -0.4
Or see this region's nucleotide sequence