Experiment: Paraquat dichloride 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS30330 and AZOBR_RS30335 overlap by 8 nucleotides AZOBR_RS30335 and AZOBR_RS30340 overlap by 8 nucleotides AZOBR_RS30340 and AZOBR_RS30345 are separated by 139 nucleotides
AZOBR_RS30330: AZOBR_RS30330 - hypothetical protein, at 151,242 to 151,949
_RS30330
AZOBR_RS30335: AZOBR_RS30335 - hypothetical protein, at 151,942 to 154,461
_RS30335
AZOBR_RS30340: AZOBR_RS30340 - hypothetical protein, at 154,454 to 154,762
_RS30340
AZOBR_RS30345: AZOBR_RS30345 - hypothetical protein, at 154,902 to 155,093
_RS30345
Position (kb) 151
152
153
154
155 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 151.076 kb on + strand at 151.076 kb on + strand at 151.076 kb on + strand at 151.077 kb on - strand at 151.129 kb on + strand at 151.130 kb on - strand at 151.131 kb on + strand at 151.131 kb on + strand at 151.131 kb on + strand at 151.131 kb on + strand at 151.131 kb on + strand at 151.131 kb on + strand at 151.131 kb on + strand at 151.131 kb on + strand at 151.131 kb on + strand at 151.131 kb on + strand at 151.131 kb on + strand at 151.131 kb on + strand at 151.131 kb on + strand at 151.131 kb on + strand at 151.132 kb on - strand at 151.132 kb on - strand at 151.132 kb on - strand at 151.132 kb on - strand at 151.132 kb on - strand at 151.132 kb on - strand at 151.132 kb on - strand at 151.132 kb on - strand at 151.132 kb on - strand at 151.132 kb on - strand at 151.132 kb on - strand at 151.243 kb on + strand at 151.244 kb on - strand at 151.244 kb on - strand at 151.244 kb on - strand at 151.247 kb on + strand at 151.247 kb on + strand at 151.247 kb on + strand at 151.247 kb on + strand at 151.248 kb on - strand at 151.248 kb on - strand at 151.265 kb on + strand at 151.265 kb on + strand at 151.266 kb on - strand at 151.266 kb on - strand at 151.574 kb on + strand, within AZOBR_RS30330 at 151.574 kb on + strand, within AZOBR_RS30330 at 151.574 kb on + strand, within AZOBR_RS30330 at 151.574 kb on + strand, within AZOBR_RS30330 at 151.574 kb on + strand, within AZOBR_RS30330 at 151.575 kb on - strand, within AZOBR_RS30330 at 151.575 kb on - strand, within AZOBR_RS30330 at 151.575 kb on - strand, within AZOBR_RS30330 at 151.575 kb on - strand, within AZOBR_RS30330 at 151.575 kb on - strand, within AZOBR_RS30330 at 151.575 kb on - strand, within AZOBR_RS30330 at 151.575 kb on - strand, within AZOBR_RS30330 at 151.663 kb on + strand, within AZOBR_RS30330 at 151.663 kb on + strand, within AZOBR_RS30330 at 151.663 kb on + strand, within AZOBR_RS30330 at 151.664 kb on - strand, within AZOBR_RS30330 at 151.664 kb on - strand, within AZOBR_RS30330 at 151.664 kb on - strand, within AZOBR_RS30330 at 151.664 kb on - strand, within AZOBR_RS30330 at 151.664 kb on - strand, within AZOBR_RS30330 at 151.732 kb on + strand, within AZOBR_RS30330 at 151.832 kb on + strand, within AZOBR_RS30330 at 151.832 kb on + strand, within AZOBR_RS30330 at 151.986 kb on - strand at 152.141 kb on + strand at 152.141 kb on + strand at 152.141 kb on + strand at 152.222 kb on + strand, within AZOBR_RS30335 at 152.222 kb on + strand, within AZOBR_RS30335 at 152.222 kb on + strand, within AZOBR_RS30335 at 152.223 kb on - strand, within AZOBR_RS30335 at 152.223 kb on - strand, within AZOBR_RS30335 at 152.273 kb on + strand, within AZOBR_RS30335 at 152.274 kb on - strand, within AZOBR_RS30335 at 152.274 kb on - strand, within AZOBR_RS30335 at 152.861 kb on + strand, within AZOBR_RS30335 at 152.861 kb on + strand, within AZOBR_RS30335 at 152.861 kb on + strand, within AZOBR_RS30335 at 152.861 kb on + strand, within AZOBR_RS30335 at 152.861 kb on + strand, within AZOBR_RS30335 at 152.861 kb on + strand, within AZOBR_RS30335 at 152.861 kb on + strand, within AZOBR_RS30335 at 152.861 kb on + strand, within AZOBR_RS30335 at 152.861 kb on + strand, within AZOBR_RS30335 at 152.862 kb on - strand, within AZOBR_RS30335 at 152.862 kb on - strand, within AZOBR_RS30335 at 152.862 kb on - strand, within AZOBR_RS30335 at 152.862 kb on - strand, within AZOBR_RS30335 at 152.862 kb on - strand, within AZOBR_RS30335 at 152.862 kb on - strand, within AZOBR_RS30335 at 152.862 kb on - strand, within AZOBR_RS30335 at 152.862 kb on - strand, within AZOBR_RS30335 at 152.862 kb on - strand, within AZOBR_RS30335 at 152.862 kb on - strand, within AZOBR_RS30335 at 153.046 kb on + strand, within AZOBR_RS30335 at 153.046 kb on + strand, within AZOBR_RS30335 at 153.047 kb on - strand, within AZOBR_RS30335 at 153.047 kb on - strand, within AZOBR_RS30335 at 153.221 kb on + strand, within AZOBR_RS30335 at 153.221 kb on + strand, within AZOBR_RS30335 at 153.222 kb on - strand, within AZOBR_RS30335 at 153.222 kb on - strand, within AZOBR_RS30335 at 153.222 kb on - strand, within AZOBR_RS30335 at 153.251 kb on + strand, within AZOBR_RS30335 at 153.251 kb on + strand, within AZOBR_RS30335 at 153.251 kb on + strand, within AZOBR_RS30335 at 153.251 kb on + strand, within AZOBR_RS30335 at 153.251 kb on + strand, within AZOBR_RS30335 at 153.251 kb on + strand, within AZOBR_RS30335 at 153.252 kb on - strand, within AZOBR_RS30335 at 153.347 kb on + strand, within AZOBR_RS30335 at 153.347 kb on + strand, within AZOBR_RS30335 at 153.347 kb on + strand, within AZOBR_RS30335 at 153.348 kb on - strand, within AZOBR_RS30335 at 153.348 kb on - strand, within AZOBR_RS30335 at 153.348 kb on - strand, within AZOBR_RS30335 at 153.348 kb on - strand, within AZOBR_RS30335 at 153.348 kb on - strand, within AZOBR_RS30335 at 153.870 kb on + strand, within AZOBR_RS30335 at 153.911 kb on + strand, within AZOBR_RS30335 at 153.912 kb on - strand, within AZOBR_RS30335 at 153.966 kb on + strand, within AZOBR_RS30335 at 154.025 kb on + strand, within AZOBR_RS30335 at 154.026 kb on - strand, within AZOBR_RS30335 at 154.026 kb on - strand, within AZOBR_RS30335 at 154.121 kb on + strand, within AZOBR_RS30335 at 154.121 kb on + strand, within AZOBR_RS30335 at 154.121 kb on + strand, within AZOBR_RS30335 at 154.121 kb on + strand, within AZOBR_RS30335 at 154.122 kb on - strand, within AZOBR_RS30335 at 154.122 kb on - strand, within AZOBR_RS30335 at 154.151 kb on + strand, within AZOBR_RS30335 at 154.152 kb on - strand, within AZOBR_RS30335 at 154.187 kb on + strand, within AZOBR_RS30335 at 154.188 kb on - strand, within AZOBR_RS30335 at 154.265 kb on + strand at 154.265 kb on + strand at 154.266 kb on - strand at 154.266 kb on - strand at 154.266 kb on - strand at 154.266 kb on - strand at 154.266 kb on - strand at 154.266 kb on - strand at 154.266 kb on - strand at 154.266 kb on - strand at 154.266 kb on - strand at 154.266 kb on - strand at 154.266 kb on - strand at 154.280 kb on + strand at 154.289 kb on + strand at 154.289 kb on + strand at 154.290 kb on - strand at 154.290 kb on - strand at 154.524 kb on + strand, within AZOBR_RS30340 at 154.525 kb on - strand, within AZOBR_RS30340 at 154.588 kb on + strand, within AZOBR_RS30340 at 154.650 kb on + strand, within AZOBR_RS30340 at 154.650 kb on + strand, within AZOBR_RS30340 at 154.822 kb on + strand at 154.823 kb on - strand at 155.142 kb on + strand at 155.142 kb on + strand at 155.143 kb on - strand at 155.288 kb on + strand at 155.448 kb on + strand at 155.448 kb on + strand at 155.448 kb on + strand at 155.448 kb on + strand at 155.449 kb on - strand at 155.449 kb on - strand at 155.449 kb on - strand at 155.459 kb on + strand at 155.459 kb on + strand at 155.459 kb on + strand at 155.459 kb on + strand at 155.459 kb on + strand at 155.460 kb on - strand at 155.460 kb on - strand at 155.460 kb on - strand at 155.460 kb on - strand at 155.460 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.04 mg/ml remove 151,076 + -0.0 151,076 + -0.3 151,076 + -0.5 151,077 - -0.5 151,129 + +1.0 151,130 - -1.1 151,131 + +0.3 151,131 + -3.8 151,131 + +0.3 151,131 + -0.9 151,131 + +0.2 151,131 + +0.2 151,131 + +2.5 151,131 + +0.0 151,131 + +0.6 151,131 + +0.4 151,131 + -0.4 151,131 + -0.0 151,131 + +0.2 151,131 + +0.5 151,132 - -0.6 151,132 - -0.6 151,132 - +0.4 151,132 - -0.4 151,132 - +0.6 151,132 - -2.6 151,132 - +0.0 151,132 - +1.5 151,132 - -1.1 151,132 - +1.3 151,132 - +0.5 151,243 + -1.1 151,244 - -2.0 151,244 - -0.4 151,244 - +2.0 151,247 + +0.9 151,247 + -4.1 151,247 + -0.0 151,247 + -1.4 151,248 - -0.7 151,248 - +0.8 151,265 + +0.2 151,265 + -4.4 151,266 - -0.4 151,266 - +0.1 151,574 + AZOBR_RS30330 0.47 +1.1 151,574 + AZOBR_RS30330 0.47 +1.2 151,574 + AZOBR_RS30330 0.47 +1.4 151,574 + AZOBR_RS30330 0.47 -0.5 151,574 + AZOBR_RS30330 0.47 +0.7 151,575 - AZOBR_RS30330 0.47 -0.1 151,575 - AZOBR_RS30330 0.47 -0.2 151,575 - AZOBR_RS30330 0.47 -1.0 151,575 - AZOBR_RS30330 0.47 +0.0 151,575 - AZOBR_RS30330 0.47 +1.0 151,575 - AZOBR_RS30330 0.47 +1.1 151,575 - AZOBR_RS30330 0.47 +0.7 151,663 + AZOBR_RS30330 0.59 +0.6 151,663 + AZOBR_RS30330 0.59 +0.5 151,663 + AZOBR_RS30330 0.59 +1.3 151,664 - AZOBR_RS30330 0.60 -3.9 151,664 - AZOBR_RS30330 0.60 -3.4 151,664 - AZOBR_RS30330 0.60 -0.8 151,664 - AZOBR_RS30330 0.60 -0.5 151,664 - AZOBR_RS30330 0.60 +0.3 151,732 + AZOBR_RS30330 0.69 -0.8 151,832 + AZOBR_RS30330 0.83 -0.5 151,832 + AZOBR_RS30330 0.83 -0.8 151,986 - +0.3 152,141 + +0.4 152,141 + +1.5 152,141 + +0.5 152,222 + AZOBR_RS30335 0.11 -0.8 152,222 + AZOBR_RS30335 0.11 +0.7 152,222 + AZOBR_RS30335 0.11 -0.4 152,223 - AZOBR_RS30335 0.11 -0.6 152,223 - AZOBR_RS30335 0.11 +1.0 152,273 + AZOBR_RS30335 0.13 +1.9 152,274 - AZOBR_RS30335 0.13 +1.3 152,274 - AZOBR_RS30335 0.13 +1.9 152,861 + AZOBR_RS30335 0.36 -2.7 152,861 + AZOBR_RS30335 0.36 +0.9 152,861 + AZOBR_RS30335 0.36 +0.2 152,861 + AZOBR_RS30335 0.36 +0.4 152,861 + AZOBR_RS30335 0.36 +1.8 152,861 + AZOBR_RS30335 0.36 -0.6 152,861 + AZOBR_RS30335 0.36 +0.7 152,861 + AZOBR_RS30335 0.36 -0.1 152,861 + AZOBR_RS30335 0.36 +0.8 152,862 - AZOBR_RS30335 0.37 +0.1 152,862 - AZOBR_RS30335 0.37 -1.2 152,862 - AZOBR_RS30335 0.37 +0.2 152,862 - AZOBR_RS30335 0.37 -0.1 152,862 - AZOBR_RS30335 0.37 -0.4 152,862 - AZOBR_RS30335 0.37 +0.4 152,862 - AZOBR_RS30335 0.37 -1.3 152,862 - AZOBR_RS30335 0.37 -0.0 152,862 - AZOBR_RS30335 0.37 -0.4 152,862 - AZOBR_RS30335 0.37 +0.1 153,046 + AZOBR_RS30335 0.44 +2.5 153,046 + AZOBR_RS30335 0.44 +0.4 153,047 - AZOBR_RS30335 0.44 +1.3 153,047 - AZOBR_RS30335 0.44 -0.5 153,221 + AZOBR_RS30335 0.51 +1.8 153,221 + AZOBR_RS30335 0.51 -1.4 153,222 - AZOBR_RS30335 0.51 -1.3 153,222 - AZOBR_RS30335 0.51 -0.7 153,222 - AZOBR_RS30335 0.51 +0.4 153,251 + AZOBR_RS30335 0.52 +0.1 153,251 + AZOBR_RS30335 0.52 -0.3 153,251 + AZOBR_RS30335 0.52 -0.0 153,251 + AZOBR_RS30335 0.52 +0.1 153,251 + AZOBR_RS30335 0.52 +0.1 153,251 + AZOBR_RS30335 0.52 +1.7 153,252 - AZOBR_RS30335 0.52 +0.8 153,347 + AZOBR_RS30335 0.56 +1.1 153,347 + AZOBR_RS30335 0.56 +0.4 153,347 + AZOBR_RS30335 0.56 -1.4 153,348 - AZOBR_RS30335 0.56 +0.3 153,348 - AZOBR_RS30335 0.56 -2.0 153,348 - AZOBR_RS30335 0.56 -0.3 153,348 - AZOBR_RS30335 0.56 +0.3 153,348 - AZOBR_RS30335 0.56 -0.1 153,870 + AZOBR_RS30335 0.77 -0.3 153,911 + AZOBR_RS30335 0.78 +0.1 153,912 - AZOBR_RS30335 0.78 +1.0 153,966 + AZOBR_RS30335 0.80 +0.7 154,025 + AZOBR_RS30335 0.83 +0.9 154,026 - AZOBR_RS30335 0.83 -1.2 154,026 - AZOBR_RS30335 0.83 -1.0 154,121 + AZOBR_RS30335 0.86 -3.0 154,121 + AZOBR_RS30335 0.86 -2.7 154,121 + AZOBR_RS30335 0.86 +0.0 154,121 + AZOBR_RS30335 0.86 +0.4 154,122 - AZOBR_RS30335 0.87 +0.4 154,122 - AZOBR_RS30335 0.87 -2.7 154,151 + AZOBR_RS30335 0.88 +0.8 154,152 - AZOBR_RS30335 0.88 +0.8 154,187 + AZOBR_RS30335 0.89 +0.5 154,188 - AZOBR_RS30335 0.89 -0.3 154,265 + -1.0 154,265 + +0.3 154,266 - +1.5 154,266 - +0.5 154,266 - -1.4 154,266 - +0.2 154,266 - -1.3 154,266 - +0.9 154,266 - -0.8 154,266 - -0.7 154,266 - +0.8 154,266 - +0.2 154,266 - +1.3 154,280 + -2.2 154,289 + +0.3 154,289 + -0.4 154,290 - -0.8 154,290 - +0.3 154,524 + AZOBR_RS30340 0.23 +1.2 154,525 - AZOBR_RS30340 0.23 +0.7 154,588 + AZOBR_RS30340 0.43 -2.9 154,650 + AZOBR_RS30340 0.63 -2.6 154,650 + AZOBR_RS30340 0.63 +0.6 154,822 + +0.5 154,823 - +0.1 155,142 + +1.8 155,142 + +0.3 155,143 - -0.7 155,288 + +0.3 155,448 + -2.0 155,448 + +2.1 155,448 + -1.1 155,448 + +0.0 155,449 - -0.5 155,449 - +0.0 155,449 - -0.0 155,459 + -0.4 155,459 + -0.6 155,459 + +0.8 155,459 + +0.5 155,459 + -1.2 155,460 - +1.5 155,460 - -0.5 155,460 - -0.2 155,460 - +0.3 155,460 - -2.5
Or see this region's nucleotide sequence