Experiment: Paraquat dichloride 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29965 and AZOBR_RS29970 are separated by 114 nucleotides AZOBR_RS29970 and AZOBR_RS29975 are separated by 30 nucleotides AZOBR_RS29975 and AZOBR_RS29980 are separated by 132 nucleotides
AZOBR_RS29965: AZOBR_RS29965 - flagellar biosynthesis protein, at 63,937 to 65,037
_RS29965
AZOBR_RS29970: AZOBR_RS29970 - hypothetical protein, at 65,152 to 65,691
_RS29970
AZOBR_RS29975: AZOBR_RS29975 - AsnC family transcriptional regulator, at 65,722 to 66,150
_RS29975
AZOBR_RS29980: AZOBR_RS29980 - saccharopine dehydrogenase, at 66,283 to 67,410
_RS29980
Position (kb) 65
66
67 Strain fitness (log2 ratio) -2
-1
0
1 at 64.783 kb on + strand, within AZOBR_RS29965 at 64.783 kb on + strand, within AZOBR_RS29965 at 64.984 kb on + strand at 64.984 kb on + strand at 64.984 kb on + strand at 64.984 kb on + strand at 64.984 kb on + strand at 64.984 kb on + strand at 64.984 kb on + strand at 64.984 kb on + strand at 64.984 kb on + strand at 64.984 kb on + strand at 64.985 kb on - strand at 64.985 kb on - strand at 64.985 kb on - strand at 64.985 kb on - strand at 64.985 kb on - strand at 64.985 kb on - strand at 64.985 kb on - strand at 64.985 kb on - strand at 64.985 kb on - strand at 64.985 kb on - strand at 64.985 kb on - strand at 64.985 kb on - strand at 64.985 kb on - strand at 64.985 kb on - strand at 64.985 kb on - strand at 65.085 kb on + strand at 65.085 kb on + strand at 65.086 kb on - strand at 65.182 kb on + strand at 65.183 kb on - strand at 65.183 kb on - strand at 65.183 kb on - strand at 65.362 kb on + strand, within AZOBR_RS29970 at 65.363 kb on - strand, within AZOBR_RS29970 at 65.401 kb on + strand, within AZOBR_RS29970 at 65.401 kb on + strand, within AZOBR_RS29970 at 66.766 kb on + strand, within AZOBR_RS29980 at 66.766 kb on + strand, within AZOBR_RS29980 at 66.766 kb on + strand, within AZOBR_RS29980 at 66.767 kb on - strand, within AZOBR_RS29980 at 66.898 kb on + strand, within AZOBR_RS29980
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.04 mg/ml remove 64,783 + AZOBR_RS29965 0.77 -1.6 64,783 + AZOBR_RS29965 0.77 -0.0 64,984 + +0.0 64,984 + -0.1 64,984 + +0.2 64,984 + +0.0 64,984 + +0.7 64,984 + -1.1 64,984 + +0.3 64,984 + -1.8 64,984 + +0.1 64,984 + +0.3 64,985 - -0.1 64,985 - -1.4 64,985 - +0.6 64,985 - -0.1 64,985 - +0.8 64,985 - +1.4 64,985 - +0.4 64,985 - -0.8 64,985 - -0.5 64,985 - +0.4 64,985 - -2.0 64,985 - -0.5 64,985 - -0.1 64,985 - +0.7 64,985 - +0.7 65,085 + -0.1 65,085 + -0.1 65,086 - -0.3 65,182 + +1.2 65,183 - +1.0 65,183 - -1.2 65,183 - -1.7 65,362 + AZOBR_RS29970 0.39 +0.6 65,363 - AZOBR_RS29970 0.39 -0.3 65,401 + AZOBR_RS29970 0.46 +0.7 65,401 + AZOBR_RS29970 0.46 +0.8 66,766 + AZOBR_RS29980 0.43 -1.1 66,766 + AZOBR_RS29980 0.43 +1.2 66,766 + AZOBR_RS29980 0.43 -0.3 66,767 - AZOBR_RS29980 0.43 -0.8 66,898 + AZOBR_RS29980 0.55 -0.3
Or see this region's nucleotide sequence