Experiment: Paraquat dichloride 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29160 and AZOBR_RS29165 are separated by 597 nucleotides
AZOBR_RS29160: AZOBR_RS29160 - putative RNA polymerase sigma-70 factor ECF subfamily, at 666,689 to 667,213
_RS29160
AZOBR_RS29165: AZOBR_RS29165 - hypothetical protein, at 667,811 to 668,326
_RS29165
Position (kb) 667
668
669 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 666.819 kb on + strand, within AZOBR_RS29160 at 666.819 kb on + strand, within AZOBR_RS29160 at 666.819 kb on + strand, within AZOBR_RS29160 at 666.820 kb on - strand, within AZOBR_RS29160 at 666.820 kb on - strand, within AZOBR_RS29160 at 667.020 kb on + strand, within AZOBR_RS29160 at 667.020 kb on + strand, within AZOBR_RS29160 at 667.020 kb on + strand, within AZOBR_RS29160 at 667.020 kb on + strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.377 kb on + strand at 667.396 kb on + strand at 667.454 kb on + strand at 667.882 kb on + strand, within AZOBR_RS29165 at 667.950 kb on + strand, within AZOBR_RS29165 at 667.950 kb on + strand, within AZOBR_RS29165 at 667.951 kb on - strand, within AZOBR_RS29165 at 668.190 kb on + strand, within AZOBR_RS29165 at 668.190 kb on + strand, within AZOBR_RS29165 at 668.191 kb on - strand, within AZOBR_RS29165 at 668.237 kb on + strand, within AZOBR_RS29165 at 668.237 kb on + strand, within AZOBR_RS29165 at 668.237 kb on + strand, within AZOBR_RS29165 at 668.238 kb on - strand, within AZOBR_RS29165 at 668.238 kb on - strand, within AZOBR_RS29165 at 668.342 kb on + strand at 668.371 kb on + strand at 668.372 kb on - strand at 668.489 kb on + strand at 668.621 kb on + strand at 668.621 kb on + strand at 668.710 kb on + strand at 668.710 kb on + strand at 668.710 kb on + strand at 668.710 kb on + strand at 668.710 kb on + strand at 668.711 kb on - strand at 668.711 kb on - strand at 668.711 kb on - strand at 668.715 kb on - strand at 668.715 kb on - strand at 668.764 kb on + strand at 668.764 kb on + strand at 668.876 kb on + strand at 668.877 kb on - strand at 668.957 kb on + strand at 668.957 kb on + strand at 668.957 kb on + strand at 668.958 kb on - strand at 669.149 kb on + strand at 669.207 kb on + strand at 669.207 kb on + strand at 669.207 kb on + strand at 669.207 kb on + strand at 669.208 kb on - strand at 669.242 kb on + strand at 669.243 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.04 mg/ml remove 666,819 + AZOBR_RS29160 0.25 +0.1 666,819 + AZOBR_RS29160 0.25 -0.5 666,819 + AZOBR_RS29160 0.25 -0.3 666,820 - AZOBR_RS29160 0.25 -2.1 666,820 - AZOBR_RS29160 0.25 -1.1 667,020 + AZOBR_RS29160 0.63 +0.1 667,020 + AZOBR_RS29160 0.63 +0.5 667,020 + AZOBR_RS29160 0.63 -0.8 667,020 + AZOBR_RS29160 0.63 +0.3 667,021 - AZOBR_RS29160 0.63 -2.8 667,021 - AZOBR_RS29160 0.63 +0.2 667,021 - AZOBR_RS29160 0.63 -0.8 667,021 - AZOBR_RS29160 0.63 -2.3 667,021 - AZOBR_RS29160 0.63 -1.1 667,021 - AZOBR_RS29160 0.63 -0.1 667,021 - AZOBR_RS29160 0.63 -0.8 667,377 + +2.1 667,396 + +1.0 667,454 + +0.3 667,882 + AZOBR_RS29165 0.14 -0.4 667,950 + AZOBR_RS29165 0.27 -2.9 667,950 + AZOBR_RS29165 0.27 -0.4 667,951 - AZOBR_RS29165 0.27 +0.1 668,190 + AZOBR_RS29165 0.73 +1.0 668,190 + AZOBR_RS29165 0.73 -1.5 668,191 - AZOBR_RS29165 0.74 +0.9 668,237 + AZOBR_RS29165 0.83 -0.4 668,237 + AZOBR_RS29165 0.83 -0.4 668,237 + AZOBR_RS29165 0.83 -0.9 668,238 - AZOBR_RS29165 0.83 -1.0 668,238 - AZOBR_RS29165 0.83 -1.2 668,342 + +1.3 668,371 + -2.2 668,372 - +0.4 668,489 + +0.0 668,621 + -3.3 668,621 + -0.9 668,710 + -0.2 668,710 + +1.0 668,710 + -2.9 668,710 + +0.2 668,710 + +1.0 668,711 - +0.2 668,711 - -0.2 668,711 - +0.2 668,715 - +0.8 668,715 - +1.2 668,764 + +0.3 668,764 + -4.0 668,876 + +0.3 668,877 - -0.9 668,957 + +0.4 668,957 + -0.3 668,957 + +1.6 668,958 - -0.4 669,149 + +0.7 669,207 + +0.0 669,207 + -1.3 669,207 + +0.0 669,207 + +0.1 669,208 - +0.4 669,242 + +0.9 669,243 - -0.6
Or see this region's nucleotide sequence