Experiment: Paraquat dichloride 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29155 and AZOBR_RS29160 are separated by 149 nucleotides AZOBR_RS29160 and AZOBR_RS29165 are separated by 597 nucleotides
AZOBR_RS29155: AZOBR_RS29155 - hypothetical protein, at 665,562 to 666,539
_RS29155
AZOBR_RS29160: AZOBR_RS29160 - putative RNA polymerase sigma-70 factor ECF subfamily, at 666,689 to 667,213
_RS29160
AZOBR_RS29165: AZOBR_RS29165 - hypothetical protein, at 667,811 to 668,326
_RS29165
Position (kb) 666
667
668 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 666.275 kb on + strand, within AZOBR_RS29155 at 666.276 kb on - strand, within AZOBR_RS29155 at 666.276 kb on - strand, within AZOBR_RS29155 at 666.626 kb on + strand at 666.712 kb on + strand at 666.712 kb on + strand at 666.712 kb on + strand at 666.713 kb on - strand at 666.713 kb on - strand at 666.750 kb on + strand, within AZOBR_RS29160 at 666.750 kb on + strand, within AZOBR_RS29160 at 666.750 kb on + strand, within AZOBR_RS29160 at 666.751 kb on - strand, within AZOBR_RS29160 at 666.751 kb on - strand, within AZOBR_RS29160 at 666.819 kb on + strand, within AZOBR_RS29160 at 666.819 kb on + strand, within AZOBR_RS29160 at 666.819 kb on + strand, within AZOBR_RS29160 at 666.820 kb on - strand, within AZOBR_RS29160 at 666.820 kb on - strand, within AZOBR_RS29160 at 667.020 kb on + strand, within AZOBR_RS29160 at 667.020 kb on + strand, within AZOBR_RS29160 at 667.020 kb on + strand, within AZOBR_RS29160 at 667.020 kb on + strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.021 kb on - strand, within AZOBR_RS29160 at 667.377 kb on + strand at 667.396 kb on + strand at 667.454 kb on + strand at 667.882 kb on + strand, within AZOBR_RS29165 at 667.950 kb on + strand, within AZOBR_RS29165 at 667.950 kb on + strand, within AZOBR_RS29165 at 667.951 kb on - strand, within AZOBR_RS29165 at 668.190 kb on + strand, within AZOBR_RS29165 at 668.190 kb on + strand, within AZOBR_RS29165 at 668.191 kb on - strand, within AZOBR_RS29165
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.04 mg/ml remove 666,275 + AZOBR_RS29155 0.73 -0.1 666,276 - AZOBR_RS29155 0.73 -1.6 666,276 - AZOBR_RS29155 0.73 -1.2 666,626 + -1.1 666,712 + +0.0 666,712 + +0.3 666,712 + +0.9 666,713 - -0.1 666,713 - +0.2 666,750 + AZOBR_RS29160 0.12 -2.2 666,750 + AZOBR_RS29160 0.12 -0.4 666,750 + AZOBR_RS29160 0.12 -1.1 666,751 - AZOBR_RS29160 0.12 +0.5 666,751 - AZOBR_RS29160 0.12 -0.6 666,819 + AZOBR_RS29160 0.25 +0.1 666,819 + AZOBR_RS29160 0.25 -0.5 666,819 + AZOBR_RS29160 0.25 -0.3 666,820 - AZOBR_RS29160 0.25 -2.1 666,820 - AZOBR_RS29160 0.25 -1.1 667,020 + AZOBR_RS29160 0.63 +0.1 667,020 + AZOBR_RS29160 0.63 +0.5 667,020 + AZOBR_RS29160 0.63 -0.8 667,020 + AZOBR_RS29160 0.63 +0.3 667,021 - AZOBR_RS29160 0.63 -2.8 667,021 - AZOBR_RS29160 0.63 +0.2 667,021 - AZOBR_RS29160 0.63 -0.8 667,021 - AZOBR_RS29160 0.63 -2.3 667,021 - AZOBR_RS29160 0.63 -1.1 667,021 - AZOBR_RS29160 0.63 -0.1 667,021 - AZOBR_RS29160 0.63 -0.8 667,377 + +2.1 667,396 + +1.0 667,454 + +0.3 667,882 + AZOBR_RS29165 0.14 -0.4 667,950 + AZOBR_RS29165 0.27 -2.9 667,950 + AZOBR_RS29165 0.27 -0.4 667,951 - AZOBR_RS29165 0.27 +0.1 668,190 + AZOBR_RS29165 0.73 +1.0 668,190 + AZOBR_RS29165 0.73 -1.5 668,191 - AZOBR_RS29165 0.74 +0.9
Or see this region's nucleotide sequence