Experiment: Paraquat dichloride 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS28095 and AZOBR_RS28100 are separated by 298 nucleotides
AZOBR_RS28095: AZOBR_RS28095 - transporter, at 474,576 to 475,436
_RS28095
AZOBR_RS28100: AZOBR_RS28100 - LysR family transcriptional regulator, at 475,735 to 476,625
_RS28100
Position (kb) 474
475
476 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 473.772 kb on + strand at 473.772 kb on + strand at 473.772 kb on + strand at 473.773 kb on - strand at 473.773 kb on - strand at 473.994 kb on + strand at 473.994 kb on + strand at 473.994 kb on + strand at 473.994 kb on + strand at 473.994 kb on + strand at 473.994 kb on + strand at 473.994 kb on + strand at 473.995 kb on - strand at 473.995 kb on - strand at 473.995 kb on - strand at 473.997 kb on + strand at 473.997 kb on + strand at 473.997 kb on + strand at 473.997 kb on + strand at 473.998 kb on - strand at 473.998 kb on - strand at 474.051 kb on + strand at 474.051 kb on + strand at 474.051 kb on + strand at 474.052 kb on - strand at 474.052 kb on - strand at 474.178 kb on - strand at 474.189 kb on + strand at 474.190 kb on - strand at 474.195 kb on + strand at 474.195 kb on + strand at 474.195 kb on + strand at 474.196 kb on - strand at 474.435 kb on + strand at 474.436 kb on - strand at 474.436 kb on - strand at 474.437 kb on + strand at 474.437 kb on + strand at 474.478 kb on + strand at 474.478 kb on + strand at 474.524 kb on + strand at 474.530 kb on + strand at 474.530 kb on + strand at 474.530 kb on + strand at 474.530 kb on + strand at 474.531 kb on - strand at 474.531 kb on - strand at 474.543 kb on - strand at 474.791 kb on - strand, within AZOBR_RS28095 at 474.791 kb on - strand, within AZOBR_RS28095 at 474.947 kb on - strand, within AZOBR_RS28095 at 475.517 kb on + strand at 475.518 kb on - strand at 475.535 kb on + strand at 475.536 kb on - strand at 475.536 kb on - strand at 475.541 kb on + strand at 475.542 kb on - strand at 475.642 kb on + strand at 475.965 kb on - strand, within AZOBR_RS28100 at 476.309 kb on + strand, within AZOBR_RS28100 at 476.310 kb on - strand, within AZOBR_RS28100 at 476.310 kb on - strand, within AZOBR_RS28100
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.04 mg/ml remove 473,772 + +0.6 473,772 + -0.2 473,772 + -0.6 473,773 - -1.5 473,773 - -0.4 473,994 + -3.5 473,994 + +1.3 473,994 + +0.2 473,994 + -1.7 473,994 + -0.0 473,994 + +1.2 473,994 + -0.1 473,995 - +1.6 473,995 - +0.1 473,995 - +0.2 473,997 + -1.3 473,997 + +0.9 473,997 + +0.6 473,997 + +0.6 473,998 - +0.8 473,998 - -1.1 474,051 + -2.9 474,051 + -2.7 474,051 + -0.1 474,052 - -0.5 474,052 - -0.6 474,178 - -1.1 474,189 + +2.0 474,190 - -3.6 474,195 + -0.4 474,195 + -1.4 474,195 + -0.1 474,196 - -1.4 474,435 + +0.5 474,436 - +0.1 474,436 - -1.0 474,437 + +2.1 474,437 + -1.4 474,478 + +0.2 474,478 + +0.2 474,524 + -3.4 474,530 + -0.4 474,530 + -1.1 474,530 + -4.3 474,530 + -0.4 474,531 - -1.9 474,531 - -0.1 474,543 - -1.7 474,791 - AZOBR_RS28095 0.25 -0.2 474,791 - AZOBR_RS28095 0.25 -0.6 474,947 - AZOBR_RS28095 0.43 -1.2 475,517 + +0.4 475,518 - +0.2 475,535 + -0.4 475,536 - +0.7 475,536 - -1.8 475,541 + +0.5 475,542 - -1.3 475,642 + -0.5 475,965 - AZOBR_RS28100 0.26 -1.1 476,309 + AZOBR_RS28100 0.64 -0.1 476,310 - AZOBR_RS28100 0.65 -0.6 476,310 - AZOBR_RS28100 0.65 +0.0
Or see this region's nucleotide sequence