Experiment: Paraquat dichloride 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23540 and AZOBR_RS23545 are separated by 14 nucleotides AZOBR_RS23545 and AZOBR_RS23550 overlap by 1 nucleotides AZOBR_RS23550 and AZOBR_RS23555 are separated by 168 nucleotides
AZOBR_RS23540: AZOBR_RS23540 - tetrathionate reductase subunit A, at 309,929 to 313,036
_RS23540
AZOBR_RS23545: AZOBR_RS23545 - tetrathionate reductase, at 313,051 to 314,184
_RS23545
AZOBR_RS23550: AZOBR_RS23550 - tetrathionate reductase subunit B, at 314,184 to 314,936
_RS23550
AZOBR_RS23555: AZOBR_RS23555 - beta-lactamase, at 315,105 to 315,995
_RS23555
Position (kb) 313
314
315 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 312.075 kb on + strand, within AZOBR_RS23540 at 312.075 kb on + strand, within AZOBR_RS23540 at 312.075 kb on + strand, within AZOBR_RS23540 at 312.267 kb on + strand, within AZOBR_RS23540 at 312.268 kb on - strand, within AZOBR_RS23540 at 312.268 kb on - strand, within AZOBR_RS23540 at 312.723 kb on + strand, within AZOBR_RS23540 at 312.723 kb on + strand, within AZOBR_RS23540 at 312.724 kb on - strand, within AZOBR_RS23540 at 312.938 kb on + strand at 312.939 kb on - strand at 312.939 kb on - strand at 312.939 kb on - strand at 313.220 kb on + strand, within AZOBR_RS23545 at 313.226 kb on + strand, within AZOBR_RS23545 at 313.633 kb on + strand, within AZOBR_RS23545 at 313.634 kb on - strand, within AZOBR_RS23545 at 313.853 kb on + strand, within AZOBR_RS23545 at 313.874 kb on + strand, within AZOBR_RS23545 at 313.875 kb on - strand, within AZOBR_RS23545 at 313.931 kb on + strand, within AZOBR_RS23545 at 313.932 kb on - strand, within AZOBR_RS23545 at 313.932 kb on - strand, within AZOBR_RS23545 at 313.932 kb on - strand, within AZOBR_RS23545 at 313.932 kb on - strand, within AZOBR_RS23545 at 313.932 kb on - strand, within AZOBR_RS23545 at 313.932 kb on - strand, within AZOBR_RS23545 at 314.060 kb on + strand, within AZOBR_RS23545 at 314.114 kb on + strand at 314.114 kb on + strand at 314.114 kb on + strand at 314.114 kb on + strand at 314.115 kb on - strand at 314.507 kb on - strand, within AZOBR_RS23550 at 314.527 kb on + strand, within AZOBR_RS23550 at 314.527 kb on + strand, within AZOBR_RS23550 at 314.527 kb on + strand, within AZOBR_RS23550 at 314.528 kb on - strand, within AZOBR_RS23550 at 314.656 kb on + strand, within AZOBR_RS23550 at 314.657 kb on - strand, within AZOBR_RS23550 at 314.657 kb on - strand, within AZOBR_RS23550 at 314.689 kb on + strand, within AZOBR_RS23550 at 314.986 kb on + strand at 315.047 kb on + strand at 315.047 kb on + strand at 315.047 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.04 mg/ml remove 312,075 + AZOBR_RS23540 0.69 -1.6 312,075 + AZOBR_RS23540 0.69 -0.4 312,075 + AZOBR_RS23540 0.69 -0.7 312,267 + AZOBR_RS23540 0.75 -0.7 312,268 - AZOBR_RS23540 0.75 +0.3 312,268 - AZOBR_RS23540 0.75 +0.1 312,723 + AZOBR_RS23540 0.90 -0.4 312,723 + AZOBR_RS23540 0.90 -1.1 312,724 - AZOBR_RS23540 0.90 +0.5 312,938 + -4.1 312,939 - -0.9 312,939 - -0.5 312,939 - -1.1 313,220 + AZOBR_RS23545 0.15 -0.1 313,226 + AZOBR_RS23545 0.15 -2.1 313,633 + AZOBR_RS23545 0.51 -0.7 313,634 - AZOBR_RS23545 0.51 -1.8 313,853 + AZOBR_RS23545 0.71 +0.5 313,874 + AZOBR_RS23545 0.73 +0.3 313,875 - AZOBR_RS23545 0.73 -0.3 313,931 + AZOBR_RS23545 0.78 +0.3 313,932 - AZOBR_RS23545 0.78 -1.1 313,932 - AZOBR_RS23545 0.78 -0.8 313,932 - AZOBR_RS23545 0.78 -0.2 313,932 - AZOBR_RS23545 0.78 +0.1 313,932 - AZOBR_RS23545 0.78 +0.2 313,932 - AZOBR_RS23545 0.78 +0.5 314,060 + AZOBR_RS23545 0.89 -0.4 314,114 + -0.4 314,114 + -0.6 314,114 + -0.8 314,114 + +2.4 314,115 - +0.0 314,507 - AZOBR_RS23550 0.43 -0.3 314,527 + AZOBR_RS23550 0.46 +1.3 314,527 + AZOBR_RS23550 0.46 +0.5 314,527 + AZOBR_RS23550 0.46 +0.3 314,528 - AZOBR_RS23550 0.46 +0.2 314,656 + AZOBR_RS23550 0.63 -2.1 314,657 - AZOBR_RS23550 0.63 -3.3 314,657 - AZOBR_RS23550 0.63 +1.6 314,689 + AZOBR_RS23550 0.67 +1.1 314,986 + -3.5 315,047 + -1.2 315,047 + +0.7 315,047 + -0.3
Or see this region's nucleotide sequence