Experiment: Paraquat dichloride 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS21155 and AZOBR_RS21160 are separated by 232 nucleotides AZOBR_RS21160 and AZOBR_RS21165 are separated by 4 nucleotides AZOBR_RS21165 and AZOBR_RS21170 overlap by 8 nucleotides
AZOBR_RS21155: AZOBR_RS21155 - hypothetical protein, at 1,529,273 to 1,529,974
_RS21155
AZOBR_RS21160: AZOBR_RS21160 - hypothetical protein, at 1,530,207 to 1,530,782
_RS21160
AZOBR_RS21165: AZOBR_RS21165 - paraquat-inducible protein A, at 1,530,787 to 1,531,419
_RS21165
AZOBR_RS21170: AZOBR_RS21170 - hypothetical protein, at 1,531,412 to 1,533,106
_RS21170
Position (kb) 1530
1531 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 1529.463 kb on + strand, within AZOBR_RS21155 at 1529.658 kb on - strand, within AZOBR_RS21155 at 1529.690 kb on + strand, within AZOBR_RS21155 at 1529.691 kb on - strand, within AZOBR_RS21155 at 1529.765 kb on + strand, within AZOBR_RS21155 at 1529.765 kb on + strand, within AZOBR_RS21155 at 1529.792 kb on + strand, within AZOBR_RS21155 at 1529.793 kb on - strand, within AZOBR_RS21155 at 1529.793 kb on - strand, within AZOBR_RS21155 at 1529.805 kb on - strand, within AZOBR_RS21155 at 1530.135 kb on - strand at 1530.486 kb on + strand, within AZOBR_RS21160 at 1530.487 kb on - strand, within AZOBR_RS21160 at 1530.487 kb on - strand, within AZOBR_RS21160 at 1530.487 kb on - strand, within AZOBR_RS21160 at 1530.613 kb on - strand, within AZOBR_RS21160 at 1530.613 kb on - strand, within AZOBR_RS21160 at 1530.940 kb on + strand, within AZOBR_RS21165 at 1530.940 kb on + strand, within AZOBR_RS21165 at 1530.940 kb on + strand, within AZOBR_RS21165 at 1530.941 kb on - strand, within AZOBR_RS21165 at 1530.941 kb on - strand, within AZOBR_RS21165 at 1530.941 kb on - strand, within AZOBR_RS21165 at 1530.980 kb on - strand, within AZOBR_RS21165 at 1531.114 kb on + strand, within AZOBR_RS21165 at 1531.114 kb on + strand, within AZOBR_RS21165 at 1531.115 kb on - strand, within AZOBR_RS21165 at 1531.115 kb on - strand, within AZOBR_RS21165 at 1531.715 kb on + strand, within AZOBR_RS21170 at 1531.716 kb on - strand, within AZOBR_RS21170
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.04 mg/ml remove 1,529,463 + AZOBR_RS21155 0.27 -0.4 1,529,658 - AZOBR_RS21155 0.55 -0.7 1,529,690 + AZOBR_RS21155 0.59 -4.5 1,529,691 - AZOBR_RS21155 0.60 +0.8 1,529,765 + AZOBR_RS21155 0.70 -0.4 1,529,765 + AZOBR_RS21155 0.70 -1.3 1,529,792 + AZOBR_RS21155 0.74 +0.4 1,529,793 - AZOBR_RS21155 0.74 -0.4 1,529,793 - AZOBR_RS21155 0.74 -0.3 1,529,805 - AZOBR_RS21155 0.76 -0.2 1,530,135 - +1.9 1,530,486 + AZOBR_RS21160 0.48 -0.8 1,530,487 - AZOBR_RS21160 0.49 +0.0 1,530,487 - AZOBR_RS21160 0.49 -0.4 1,530,487 - AZOBR_RS21160 0.49 -1.2 1,530,613 - AZOBR_RS21160 0.70 +0.0 1,530,613 - AZOBR_RS21160 0.70 -0.2 1,530,940 + AZOBR_RS21165 0.24 -0.4 1,530,940 + AZOBR_RS21165 0.24 -0.4 1,530,940 + AZOBR_RS21165 0.24 -0.9 1,530,941 - AZOBR_RS21165 0.24 -0.1 1,530,941 - AZOBR_RS21165 0.24 +0.8 1,530,941 - AZOBR_RS21165 0.24 -0.1 1,530,980 - AZOBR_RS21165 0.30 -2.0 1,531,114 + AZOBR_RS21165 0.52 +0.3 1,531,114 + AZOBR_RS21165 0.52 +0.5 1,531,115 - AZOBR_RS21165 0.52 +1.9 1,531,115 - AZOBR_RS21165 0.52 -0.6 1,531,715 + AZOBR_RS21170 0.18 -0.8 1,531,716 - AZOBR_RS21170 0.18 -1.2
Or see this region's nucleotide sequence