Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS19515
Experiment: Paraquat dichloride 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.04 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,150,066 | + | +0.4 | |||
1,150,067 | - | +1.0 | |||
1,150,444 | - | AZOBR_RS19510 | 0.33 | +1.1 | |
1,150,563 | + | AZOBR_RS19510 | 0.58 | +0.6 | |
1,150,564 | - | AZOBR_RS19510 | 0.58 | +2.6 | |
1,150,564 | - | AZOBR_RS19510 | 0.58 | +0.2 | |
1,150,584 | + | AZOBR_RS19510 | 0.62 | -0.9 | |
1,150,584 | + | AZOBR_RS19510 | 0.62 | +0.3 | |
1,150,587 | + | +1.1 | |||
1,150,837 | + | -1.4 | |||
1,150,838 | - | AZOBR_RS19515 | 0.10 | -3.1 | |
1,150,900 | + | AZOBR_RS19515 | 0.24 | -2.1 | |
1,150,901 | - | AZOBR_RS19515 | 0.24 | -2.1 | |
1,151,393 | + | -1.5 | |||
1,151,439 | - | -1.4 | |||
1,151,494 | + | +1.0 | |||
1,151,494 | + | +0.3 |
Or see this region's nucleotide sequence