Experiment: Paraquat dichloride 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS19260 and AZOBR_RS19265 are separated by 308 nucleotides AZOBR_RS19265 and AZOBR_RS19270 are separated by 30 nucleotides AZOBR_RS19270 and AZOBR_RS19275 overlap by 11 nucleotides
AZOBR_RS19260: AZOBR_RS19260 - hypothetical protein, at 1,088,588 to 1,089,736
_RS19260
AZOBR_RS19265: AZOBR_RS19265 - sulfate transporter subunit, at 1,090,045 to 1,091,097
_RS19265
AZOBR_RS19270: AZOBR_RS19270 - sulfate transporter, at 1,091,128 to 1,091,988
_RS19270
AZOBR_RS19275: AZOBR_RS19275 - sulfate/thiosulfate transporter permease subunit, at 1,091,978 to 1,092,838
_RS19275
Position (kb) 1090
1091
1092 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1089.154 kb on + strand, within AZOBR_RS19260 at 1089.155 kb on - strand, within AZOBR_RS19260 at 1089.931 kb on - strand at 1090.028 kb on + strand at 1090.028 kb on + strand at 1090.028 kb on + strand at 1090.029 kb on - strand at 1090.029 kb on - strand at 1090.029 kb on - strand at 1090.095 kb on - strand at 1090.187 kb on - strand, within AZOBR_RS19265 at 1090.187 kb on - strand, within AZOBR_RS19265 at 1090.207 kb on + strand, within AZOBR_RS19265 at 1090.207 kb on + strand, within AZOBR_RS19265 at 1090.208 kb on - strand, within AZOBR_RS19265 at 1090.357 kb on + strand, within AZOBR_RS19265 at 1090.357 kb on + strand, within AZOBR_RS19265 at 1090.358 kb on - strand, within AZOBR_RS19265 at 1090.358 kb on - strand, within AZOBR_RS19265 at 1090.436 kb on - strand, within AZOBR_RS19265 at 1090.567 kb on + strand, within AZOBR_RS19265 at 1090.567 kb on + strand, within AZOBR_RS19265 at 1090.567 kb on + strand, within AZOBR_RS19265 at 1090.567 kb on + strand, within AZOBR_RS19265 at 1090.568 kb on - strand, within AZOBR_RS19265 at 1090.586 kb on - strand, within AZOBR_RS19265 at 1090.882 kb on + strand, within AZOBR_RS19265 at 1090.882 kb on + strand, within AZOBR_RS19265 at 1090.897 kb on + strand, within AZOBR_RS19265 at 1090.898 kb on - strand, within AZOBR_RS19265 at 1090.970 kb on - strand, within AZOBR_RS19265 at 1090.993 kb on - strand at 1091.221 kb on + strand, within AZOBR_RS19270 at 1091.221 kb on + strand, within AZOBR_RS19270 at 1091.222 kb on - strand, within AZOBR_RS19270 at 1091.510 kb on - strand, within AZOBR_RS19270 at 1091.510 kb on - strand, within AZOBR_RS19270 at 1091.510 kb on - strand, within AZOBR_RS19270 at 1091.510 kb on - strand, within AZOBR_RS19270 at 1091.875 kb on + strand, within AZOBR_RS19270 at 1091.876 kb on - strand, within AZOBR_RS19270 at 1091.876 kb on - strand, within AZOBR_RS19270 at 1091.876 kb on - strand, within AZOBR_RS19270 at 1091.881 kb on + strand, within AZOBR_RS19270 at 1091.882 kb on - strand, within AZOBR_RS19270 at 1091.882 kb on - strand, within AZOBR_RS19270 at 1091.882 kb on - strand, within AZOBR_RS19270 at 1091.882 kb on - strand, within AZOBR_RS19270 at 1091.986 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.04 mg/ml remove 1,089,154 + AZOBR_RS19260 0.49 -0.0 1,089,155 - AZOBR_RS19260 0.49 -2.7 1,089,931 - +1.4 1,090,028 + +0.1 1,090,028 + -0.8 1,090,028 + -3.6 1,090,029 - -0.6 1,090,029 - -0.5 1,090,029 - +2.0 1,090,095 - +1.0 1,090,187 - AZOBR_RS19265 0.13 +0.7 1,090,187 - AZOBR_RS19265 0.13 -3.4 1,090,207 + AZOBR_RS19265 0.15 +1.1 1,090,207 + AZOBR_RS19265 0.15 +0.7 1,090,208 - AZOBR_RS19265 0.15 -0.7 1,090,357 + AZOBR_RS19265 0.30 -0.6 1,090,357 + AZOBR_RS19265 0.30 -2.0 1,090,358 - AZOBR_RS19265 0.30 +0.2 1,090,358 - AZOBR_RS19265 0.30 -0.9 1,090,436 - AZOBR_RS19265 0.37 +0.9 1,090,567 + AZOBR_RS19265 0.50 +0.8 1,090,567 + AZOBR_RS19265 0.50 -0.4 1,090,567 + AZOBR_RS19265 0.50 +2.4 1,090,567 + AZOBR_RS19265 0.50 +1.4 1,090,568 - AZOBR_RS19265 0.50 +0.8 1,090,586 - AZOBR_RS19265 0.51 +2.5 1,090,882 + AZOBR_RS19265 0.79 +1.0 1,090,882 + AZOBR_RS19265 0.79 -1.9 1,090,897 + AZOBR_RS19265 0.81 -2.6 1,090,898 - AZOBR_RS19265 0.81 +1.7 1,090,970 - AZOBR_RS19265 0.88 +1.3 1,090,993 - -2.0 1,091,221 + AZOBR_RS19270 0.11 -1.0 1,091,221 + AZOBR_RS19270 0.11 -0.4 1,091,222 - AZOBR_RS19270 0.11 +1.1 1,091,510 - AZOBR_RS19270 0.44 +0.3 1,091,510 - AZOBR_RS19270 0.44 +0.6 1,091,510 - AZOBR_RS19270 0.44 +0.7 1,091,510 - AZOBR_RS19270 0.44 +0.2 1,091,875 + AZOBR_RS19270 0.87 +2.3 1,091,876 - AZOBR_RS19270 0.87 +0.9 1,091,876 - AZOBR_RS19270 0.87 +0.9 1,091,876 - AZOBR_RS19270 0.87 +0.2 1,091,881 + AZOBR_RS19270 0.87 +0.6 1,091,882 - AZOBR_RS19270 0.88 +1.2 1,091,882 - AZOBR_RS19270 0.88 +1.8 1,091,882 - AZOBR_RS19270 0.88 +0.0 1,091,882 - AZOBR_RS19270 0.88 -0.2 1,091,986 + +0.3
Or see this region's nucleotide sequence