Experiment: Paraquat dichloride 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS16550 and AZOBR_RS16555 are separated by 98 nucleotides AZOBR_RS16555 and AZOBR_RS16560 are separated by 192 nucleotides AZOBR_RS16560 and AZOBR_RS16565 are separated by 284 nucleotides
AZOBR_RS16550: AZOBR_RS16550 - ABC transporter permease, at 465,008 to 466,639
_RS16550
AZOBR_RS16555: AZOBR_RS16555 - ABC transporter substrate-binding protein, at 466,738 to 467,724
_RS16555
AZOBR_RS16560: AZOBR_RS16560 - hypothetical protein, at 467,917 to 468,306
_RS16560
AZOBR_RS16565: AZOBR_RS16565 - selenoprotein, at 468,591 to 468,872
_RS16565
Position (kb) 466
467
468 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 466.282 kb on - strand, within AZOBR_RS16550 at 466.282 kb on - strand, within AZOBR_RS16550 at 466.282 kb on - strand, within AZOBR_RS16550 at 466.808 kb on + strand at 466.809 kb on - strand at 466.858 kb on + strand, within AZOBR_RS16555 at 467.063 kb on + strand, within AZOBR_RS16555 at 467.063 kb on + strand, within AZOBR_RS16555 at 467.081 kb on + strand, within AZOBR_RS16555 at 467.165 kb on + strand, within AZOBR_RS16555 at 467.165 kb on + strand, within AZOBR_RS16555 at 467.166 kb on - strand, within AZOBR_RS16555 at 467.166 kb on - strand, within AZOBR_RS16555 at 467.168 kb on + strand, within AZOBR_RS16555 at 467.168 kb on + strand, within AZOBR_RS16555 at 467.168 kb on + strand, within AZOBR_RS16555 at 467.168 kb on + strand, within AZOBR_RS16555 at 467.169 kb on - strand, within AZOBR_RS16555 at 467.231 kb on + strand, within AZOBR_RS16555 at 467.232 kb on - strand, within AZOBR_RS16555 at 467.415 kb on - strand, within AZOBR_RS16555 at 467.631 kb on - strand at 467.631 kb on - strand at 467.631 kb on - strand at 468.256 kb on + strand, within AZOBR_RS16560 at 468.256 kb on + strand, within AZOBR_RS16560 at 468.257 kb on - strand, within AZOBR_RS16560 at 468.356 kb on - strand at 468.432 kb on + strand at 468.433 kb on - strand at 468.433 kb on - strand at 468.517 kb on + strand at 468.518 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.04 mg/ml remove 466,282 - AZOBR_RS16550 0.78 -0.3 466,282 - AZOBR_RS16550 0.78 -0.7 466,282 - AZOBR_RS16550 0.78 -0.9 466,808 + -2.9 466,809 - -0.9 466,858 + AZOBR_RS16555 0.12 -0.6 467,063 + AZOBR_RS16555 0.33 +0.2 467,063 + AZOBR_RS16555 0.33 +0.1 467,081 + AZOBR_RS16555 0.35 +0.7 467,165 + AZOBR_RS16555 0.43 -1.0 467,165 + AZOBR_RS16555 0.43 +0.3 467,166 - AZOBR_RS16555 0.43 -0.3 467,166 - AZOBR_RS16555 0.43 -2.0 467,168 + AZOBR_RS16555 0.44 -0.4 467,168 + AZOBR_RS16555 0.44 -1.5 467,168 + AZOBR_RS16555 0.44 +0.1 467,168 + AZOBR_RS16555 0.44 -1.4 467,169 - AZOBR_RS16555 0.44 +1.2 467,231 + AZOBR_RS16555 0.50 -0.6 467,232 - AZOBR_RS16555 0.50 +0.0 467,415 - AZOBR_RS16555 0.69 -0.5 467,631 - -0.6 467,631 - -0.5 467,631 - -0.3 468,256 + AZOBR_RS16560 0.87 +1.7 468,256 + AZOBR_RS16560 0.87 -0.5 468,257 - AZOBR_RS16560 0.87 +0.5 468,356 - -2.6 468,432 + -0.3 468,433 - -2.5 468,433 - +0.6 468,517 + +0.3 468,518 - +0.2
Or see this region's nucleotide sequence