Experiment: Paraquat dichloride 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS16515 and AZOBR_RS16520 are separated by 130 nucleotides AZOBR_RS16520 and AZOBR_RS16525 are separated by 210 nucleotides
AZOBR_RS16515: AZOBR_RS16515 - S-(hydroxymethyl)glutathione dehydrogenase, at 455,654 to 456,772
_RS16515
AZOBR_RS16520: AZOBR_RS16520 - LysR family transcriptional regulator, at 456,903 to 457,820
_RS16520
AZOBR_RS16525: AZOBR_RS16525 - hypothetical protein, at 458,031 to 458,855
_RS16525
Position (kb) 456
457
458 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 455.995 kb on - strand, within AZOBR_RS16515 at 456.048 kb on + strand, within AZOBR_RS16515 at 456.048 kb on + strand, within AZOBR_RS16515 at 456.366 kb on + strand, within AZOBR_RS16515 at 456.366 kb on + strand, within AZOBR_RS16515 at 456.366 kb on + strand, within AZOBR_RS16515 at 456.366 kb on + strand, within AZOBR_RS16515 at 456.366 kb on + strand, within AZOBR_RS16515 at 456.367 kb on - strand, within AZOBR_RS16515 at 456.367 kb on - strand, within AZOBR_RS16515 at 456.367 kb on - strand, within AZOBR_RS16515 at 456.367 kb on - strand, within AZOBR_RS16515 at 456.367 kb on - strand, within AZOBR_RS16515 at 456.367 kb on - strand, within AZOBR_RS16515 at 456.636 kb on + strand, within AZOBR_RS16515 at 456.636 kb on + strand, within AZOBR_RS16515 at 456.637 kb on - strand, within AZOBR_RS16515 at 456.637 kb on - strand, within AZOBR_RS16515 at 456.637 kb on - strand, within AZOBR_RS16515 at 456.637 kb on - strand, within AZOBR_RS16515 at 457.051 kb on - strand, within AZOBR_RS16520 at 457.207 kb on - strand, within AZOBR_RS16520 at 457.413 kb on + strand, within AZOBR_RS16520 at 457.645 kb on - strand, within AZOBR_RS16520 at 457.645 kb on - strand, within AZOBR_RS16520 at 457.647 kb on + strand, within AZOBR_RS16520 at 457.647 kb on + strand, within AZOBR_RS16520 at 457.647 kb on + strand, within AZOBR_RS16520 at 457.647 kb on + strand, within AZOBR_RS16520 at 457.647 kb on + strand, within AZOBR_RS16520 at 457.648 kb on - strand, within AZOBR_RS16520 at 457.648 kb on - strand, within AZOBR_RS16520 at 457.648 kb on - strand, within AZOBR_RS16520 at 457.648 kb on - strand, within AZOBR_RS16520 at 457.731 kb on + strand at 457.732 kb on - strand at 458.049 kb on + strand at 458.050 kb on - strand at 458.149 kb on - strand, within AZOBR_RS16525 at 458.149 kb on - strand, within AZOBR_RS16525 at 458.149 kb on - strand, within AZOBR_RS16525 at 458.226 kb on + strand, within AZOBR_RS16525 at 458.226 kb on + strand, within AZOBR_RS16525 at 458.227 kb on - strand, within AZOBR_RS16525 at 458.227 kb on - strand, within AZOBR_RS16525 at 458.325 kb on + strand, within AZOBR_RS16525 at 458.350 kb on - strand, within AZOBR_RS16525 at 458.350 kb on - strand, within AZOBR_RS16525 at 458.350 kb on - strand, within AZOBR_RS16525 at 458.460 kb on - strand, within AZOBR_RS16525 at 458.523 kb on + strand, within AZOBR_RS16525 at 458.523 kb on + strand, within AZOBR_RS16525 at 458.523 kb on + strand, within AZOBR_RS16525 at 458.523 kb on + strand, within AZOBR_RS16525 at 458.523 kb on + strand, within AZOBR_RS16525 at 458.523 kb on + strand, within AZOBR_RS16525 at 458.523 kb on + strand, within AZOBR_RS16525 at 458.523 kb on + strand, within AZOBR_RS16525 at 458.523 kb on + strand, within AZOBR_RS16525 at 458.524 kb on - strand, within AZOBR_RS16525 at 458.529 kb on + strand, within AZOBR_RS16525 at 458.529 kb on + strand, within AZOBR_RS16525 at 458.529 kb on + strand, within AZOBR_RS16525 at 458.529 kb on + strand, within AZOBR_RS16525 at 458.529 kb on + strand, within AZOBR_RS16525 at 458.529 kb on + strand, within AZOBR_RS16525 at 458.529 kb on + strand, within AZOBR_RS16525 at 458.530 kb on - strand, within AZOBR_RS16525 at 458.530 kb on - strand, within AZOBR_RS16525 at 458.622 kb on + strand, within AZOBR_RS16525 at 458.623 kb on - strand, within AZOBR_RS16525 at 458.631 kb on + strand, within AZOBR_RS16525 at 458.632 kb on - strand, within AZOBR_RS16525 at 458.632 kb on - strand, within AZOBR_RS16525 at 458.632 kb on - strand, within AZOBR_RS16525 at 458.632 kb on - strand, within AZOBR_RS16525 at 458.633 kb on + strand, within AZOBR_RS16525 at 458.633 kb on + strand, within AZOBR_RS16525 at 458.633 kb on + strand, within AZOBR_RS16525 at 458.634 kb on - strand, within AZOBR_RS16525 at 458.634 kb on - strand, within AZOBR_RS16525
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.04 mg/ml remove 455,995 - AZOBR_RS16515 0.30 +0.6 456,048 + AZOBR_RS16515 0.35 +1.0 456,048 + AZOBR_RS16515 0.35 +2.1 456,366 + AZOBR_RS16515 0.64 +0.8 456,366 + AZOBR_RS16515 0.64 -2.4 456,366 + AZOBR_RS16515 0.64 -0.4 456,366 + AZOBR_RS16515 0.64 +1.1 456,366 + AZOBR_RS16515 0.64 +1.0 456,367 - AZOBR_RS16515 0.64 -1.1 456,367 - AZOBR_RS16515 0.64 +0.1 456,367 - AZOBR_RS16515 0.64 -0.1 456,367 - AZOBR_RS16515 0.64 +0.5 456,367 - AZOBR_RS16515 0.64 -0.2 456,367 - AZOBR_RS16515 0.64 +2.3 456,636 + AZOBR_RS16515 0.88 +0.9 456,636 + AZOBR_RS16515 0.88 -0.6 456,637 - AZOBR_RS16515 0.88 +0.5 456,637 - AZOBR_RS16515 0.88 +0.3 456,637 - AZOBR_RS16515 0.88 -0.5 456,637 - AZOBR_RS16515 0.88 +0.2 457,051 - AZOBR_RS16520 0.16 +2.3 457,207 - AZOBR_RS16520 0.33 +1.3 457,413 + AZOBR_RS16520 0.56 -2.8 457,645 - AZOBR_RS16520 0.81 +0.0 457,645 - AZOBR_RS16520 0.81 -1.9 457,647 + AZOBR_RS16520 0.81 -0.3 457,647 + AZOBR_RS16520 0.81 -0.4 457,647 + AZOBR_RS16520 0.81 +0.5 457,647 + AZOBR_RS16520 0.81 +1.0 457,647 + AZOBR_RS16520 0.81 -0.1 457,648 - AZOBR_RS16520 0.81 +0.2 457,648 - AZOBR_RS16520 0.81 -2.7 457,648 - AZOBR_RS16520 0.81 +0.8 457,648 - AZOBR_RS16520 0.81 +0.2 457,731 + +1.0 457,732 - +1.3 458,049 + -0.6 458,050 - -0.1 458,149 - AZOBR_RS16525 0.14 -1.4 458,149 - AZOBR_RS16525 0.14 -0.6 458,149 - AZOBR_RS16525 0.14 +1.6 458,226 + AZOBR_RS16525 0.24 +2.3 458,226 + AZOBR_RS16525 0.24 +0.2 458,227 - AZOBR_RS16525 0.24 -0.5 458,227 - AZOBR_RS16525 0.24 +0.3 458,325 + AZOBR_RS16525 0.36 -1.0 458,350 - AZOBR_RS16525 0.39 -1.1 458,350 - AZOBR_RS16525 0.39 +1.7 458,350 - AZOBR_RS16525 0.39 +0.3 458,460 - AZOBR_RS16525 0.52 -0.6 458,523 + AZOBR_RS16525 0.60 -1.2 458,523 + AZOBR_RS16525 0.60 +0.6 458,523 + AZOBR_RS16525 0.60 -2.6 458,523 + AZOBR_RS16525 0.60 -3.5 458,523 + AZOBR_RS16525 0.60 -0.5 458,523 + AZOBR_RS16525 0.60 -0.5 458,523 + AZOBR_RS16525 0.60 +0.5 458,523 + AZOBR_RS16525 0.60 +0.5 458,523 + AZOBR_RS16525 0.60 -0.7 458,524 - AZOBR_RS16525 0.60 -0.7 458,529 + AZOBR_RS16525 0.60 +0.9 458,529 + AZOBR_RS16525 0.60 +0.4 458,529 + AZOBR_RS16525 0.60 -0.7 458,529 + AZOBR_RS16525 0.60 +0.5 458,529 + AZOBR_RS16525 0.60 -0.2 458,529 + AZOBR_RS16525 0.60 -0.4 458,529 + AZOBR_RS16525 0.60 +0.3 458,530 - AZOBR_RS16525 0.60 +0.0 458,530 - AZOBR_RS16525 0.60 -0.3 458,622 + AZOBR_RS16525 0.72 -0.3 458,623 - AZOBR_RS16525 0.72 -2.5 458,631 + AZOBR_RS16525 0.73 +1.1 458,632 - AZOBR_RS16525 0.73 +0.9 458,632 - AZOBR_RS16525 0.73 -0.5 458,632 - AZOBR_RS16525 0.73 +0.2 458,632 - AZOBR_RS16525 0.73 -0.9 458,633 + AZOBR_RS16525 0.73 -2.9 458,633 + AZOBR_RS16525 0.73 -0.1 458,633 + AZOBR_RS16525 0.73 -2.9 458,634 - AZOBR_RS16525 0.73 -0.3 458,634 - AZOBR_RS16525 0.73 -0.6
Or see this region's nucleotide sequence