Experiment: Paraquat dichloride 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS16220 and AZOBR_RS16225 are separated by 264 nucleotides
AZOBR_RS16220: AZOBR_RS16220 - ribonuclease D, at 388,401 to 389,567
_RS16220
AZOBR_RS16225: AZOBR_RS16225 - hypothetical protein, at 389,832 to 391,121
_RS16225
Position (kb) 389
390
391
392 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 388.849 kb on - strand, within AZOBR_RS16220 at 388.849 kb on - strand, within AZOBR_RS16220 at 388.884 kb on + strand, within AZOBR_RS16220 at 388.971 kb on + strand, within AZOBR_RS16220 at 389.565 kb on + strand at 389.566 kb on - strand at 389.716 kb on + strand at 389.719 kb on + strand at 390.096 kb on + strand, within AZOBR_RS16225 at 390.096 kb on + strand, within AZOBR_RS16225 at 390.096 kb on + strand, within AZOBR_RS16225 at 390.141 kb on + strand, within AZOBR_RS16225 at 390.142 kb on - strand, within AZOBR_RS16225 at 390.235 kb on - strand, within AZOBR_RS16225 at 390.252 kb on + strand, within AZOBR_RS16225 at 390.475 kb on - strand, within AZOBR_RS16225 at 390.475 kb on - strand, within AZOBR_RS16225 at 390.486 kb on + strand, within AZOBR_RS16225 at 390.487 kb on - strand, within AZOBR_RS16225 at 390.487 kb on - strand, within AZOBR_RS16225 at 390.487 kb on - strand, within AZOBR_RS16225 at 390.487 kb on - strand, within AZOBR_RS16225 at 390.529 kb on - strand, within AZOBR_RS16225 at 390.561 kb on + strand, within AZOBR_RS16225 at 390.561 kb on + strand, within AZOBR_RS16225 at 390.561 kb on + strand, within AZOBR_RS16225 at 390.561 kb on + strand, within AZOBR_RS16225 at 390.562 kb on - strand, within AZOBR_RS16225 at 391.014 kb on + strand at 391.014 kb on + strand at 391.293 kb on + strand at 391.313 kb on - strand at 391.612 kb on - strand at 391.675 kb on - strand at 391.918 kb on + strand at 391.918 kb on + strand at 391.919 kb on - strand at 391.919 kb on - strand at 392.119 kb on + strand at 392.119 kb on + strand at 392.119 kb on + strand at 392.120 kb on - strand at 392.120 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.04 mg/ml remove 388,849 - AZOBR_RS16220 0.38 -1.9 388,849 - AZOBR_RS16220 0.38 -0.2 388,884 + AZOBR_RS16220 0.41 -1.8 388,971 + AZOBR_RS16220 0.49 -2.2 389,565 + +0.2 389,566 - -3.0 389,716 + +0.2 389,719 + +0.3 390,096 + AZOBR_RS16225 0.20 +1.3 390,096 + AZOBR_RS16225 0.20 +0.8 390,096 + AZOBR_RS16225 0.20 -0.3 390,141 + AZOBR_RS16225 0.24 -3.2 390,142 - AZOBR_RS16225 0.24 +0.5 390,235 - AZOBR_RS16225 0.31 -0.3 390,252 + AZOBR_RS16225 0.33 +1.0 390,475 - AZOBR_RS16225 0.50 -0.3 390,475 - AZOBR_RS16225 0.50 -0.7 390,486 + AZOBR_RS16225 0.51 +0.2 390,487 - AZOBR_RS16225 0.51 -0.6 390,487 - AZOBR_RS16225 0.51 +0.3 390,487 - AZOBR_RS16225 0.51 +1.0 390,487 - AZOBR_RS16225 0.51 +0.4 390,529 - AZOBR_RS16225 0.54 +0.9 390,561 + AZOBR_RS16225 0.57 -3.0 390,561 + AZOBR_RS16225 0.57 -0.5 390,561 + AZOBR_RS16225 0.57 +0.6 390,561 + AZOBR_RS16225 0.57 +0.3 390,562 - AZOBR_RS16225 0.57 -0.2 391,014 + +1.4 391,014 + +0.5 391,293 + -2.4 391,313 - -1.3 391,612 - +0.5 391,675 - +0.9 391,918 + +0.0 391,918 + +0.1 391,919 - +2.5 391,919 - -0.7 392,119 + +2.3 392,119 + -2.2 392,119 + -0.2 392,120 - -2.0 392,120 - -1.0
Or see this region's nucleotide sequence