Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS08345
Experiment: Paraquat dichloride 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.04 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,753,351 | - | +0.6 | |||
1,753,360 | + | +1.5 | |||
1,753,361 | - | -1.6 | |||
1,753,423 | + | -4.1 | |||
1,753,424 | - | -2.6 | |||
1,753,424 | - | -4.4 | |||
1,753,424 | - | -2.3 | |||
1,753,483 | + | AZOBR_RS08340 | 0.16 | -3.7 | |
1,753,484 | - | AZOBR_RS08340 | 0.16 | -4.4 | |
1,753,484 | - | AZOBR_RS08340 | 0.16 | -2.8 | |
1,754,207 | + | -4.2 | |||
1,754,208 | - | -2.2 | |||
1,754,295 | - | AZOBR_RS08345 | 0.16 | -2.0 | |
1,754,402 | + | AZOBR_RS08345 | 0.29 | -3.8 | |
1,754,403 | - | AZOBR_RS08345 | 0.30 | -3.5 | |
1,754,403 | - | AZOBR_RS08345 | 0.30 | -3.5 | |
1,754,403 | - | AZOBR_RS08345 | 0.30 | -2.9 | |
1,754,531 | + | AZOBR_RS08345 | 0.46 | -4.3 | |
1,754,732 | + | AZOBR_RS08345 | 0.72 | -4.1 | |
1,754,733 | - | AZOBR_RS08345 | 0.72 | -2.5 | |
1,754,798 | + | AZOBR_RS08345 | 0.80 | -1.0 | |
1,755,305 | + | +0.0 | |||
1,755,306 | - | AZOBR_RS08350 | 0.31 | -2.9 |
Or see this region's nucleotide sequence