Experiment: Paraquat dichloride 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS07510 and AZOBR_RS07515 are separated by 143 nucleotides AZOBR_RS07515 and AZOBR_RS07520 are separated by 103 nucleotides AZOBR_RS07520 and AZOBR_RS07525 are separated by 106 nucleotides AZOBR_RS07525 and AZOBR_RS07530 are separated by 118 nucleotides
AZOBR_RS07510: AZOBR_RS07510 - CTP synthase, at 1,580,204 to 1,581,832
_RS07510
AZOBR_RS07515: AZOBR_RS07515 - carboxymethylenebutenolidase, at 1,581,976 to 1,582,674
_RS07515
AZOBR_RS07520: AZOBR_RS07520 - 2-dehydro-3-deoxyphosphooctonate aldolase, at 1,582,778 to 1,583,605
_RS07520
AZOBR_RS07525: AZOBR_RS07525 - DNA-binding protein, at 1,583,712 to 1,584,098
_RS07525
AZOBR_RS07530: AZOBR_RS07530 - pyrroloquinoline quinone biosynthesis protein PqqE, at 1,584,217 to 1,585,323
_RS07530
Position (kb)
1582
1583
1584 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1581.896 kb on + strand at 1581.896 kb on + strand at 1581.897 kb on - strand at 1581.897 kb on - strand at 1581.897 kb on - strand at 1581.939 kb on - strand at 1582.025 kb on - strand at 1582.025 kb on - strand at 1582.025 kb on - strand at 1582.102 kb on - strand, within AZOBR_RS07515 at 1582.402 kb on + strand, within AZOBR_RS07515 at 1582.402 kb on + strand, within AZOBR_RS07515 at 1582.402 kb on + strand, within AZOBR_RS07515 at 1582.406 kb on - strand, within AZOBR_RS07515 at 1582.561 kb on + strand, within AZOBR_RS07515 at 1584.069 kb on + strand at 1584.070 kb on - strand at 1584.070 kb on - strand at 1584.070 kb on - strand at 1584.197 kb on + strand at 1584.197 kb on + strand at 1584.197 kb on + strand at 1584.197 kb on + strand at 1584.198 kb on - strand at 1584.198 kb on - strand at 1584.198 kb on - strand at 1584.198 kb on - strand at 1584.437 kb on + strand, within AZOBR_RS07530
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.04 mg/ml remove 1,581,896 + -0.5 1,581,896 + +0.5 1,581,897 - -0.7 1,581,897 - -0.3 1,581,897 - -0.3 1,581,939 - -2.1 1,582,025 - -1.1 1,582,025 - -1.7 1,582,025 - +3.6 1,582,102 - AZOBR_RS07515 0.18 +0.2 1,582,402 + AZOBR_RS07515 0.61 +0.2 1,582,402 + AZOBR_RS07515 0.61 -0.2 1,582,402 + AZOBR_RS07515 0.61 -0.5 1,582,406 - AZOBR_RS07515 0.62 +0.7 1,582,561 + AZOBR_RS07515 0.84 +1.7 1,584,069 + -1.5 1,584,070 - -1.4 1,584,070 - -1.7 1,584,070 - +0.8 1,584,197 + +0.7 1,584,197 + -0.5 1,584,197 + +0.1 1,584,197 + +0.1 1,584,198 - -0.2 1,584,198 - +0.5 1,584,198 - +0.6 1,584,198 - +1.1 1,584,437 + AZOBR_RS07530 0.20 -0.9
Or see this region's nucleotide sequence