Experiment: Paraquat dichloride 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS03060 and AZOBR_RS03065 overlap by 23 nucleotides AZOBR_RS03065 and AZOBR_RS03070 are separated by 89 nucleotides AZOBR_RS03070 and AZOBR_RS03075 are separated by 169 nucleotides AZOBR_RS03075 and AZOBR_RS03080 are separated by 141 nucleotides
AZOBR_RS03060: AZOBR_RS03060 - molybdopterin biosynthesis protein MoeA, at 653,302 to 655,272
_RS03060
AZOBR_RS03065: AZOBR_RS03065 - pirin, at 655,250 to 656,152
_RS03065
AZOBR_RS03070: AZOBR_RS03070 - hypothetical protein, at 656,242 to 656,520
_RS03070
AZOBR_RS03075: AZOBR_RS03075 - tRNA-Ala, at 656,690 to 656,765
_RS03075
AZOBR_RS03080: AZOBR_RS03080 - hypothetical protein, at 656,907 to 657,305
_RS03080
Position (kb) 655
656
657 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 654.421 kb on + strand, within AZOBR_RS03060 at 654.422 kb on - strand, within AZOBR_RS03060 at 654.422 kb on - strand, within AZOBR_RS03060 at 654.422 kb on - strand, within AZOBR_RS03060 at 655.145 kb on - strand at 655.525 kb on - strand, within AZOBR_RS03065 at 655.525 kb on - strand, within AZOBR_RS03065 at 655.628 kb on + strand, within AZOBR_RS03065 at 655.628 kb on + strand, within AZOBR_RS03065 at 655.628 kb on + strand, within AZOBR_RS03065 at 655.628 kb on + strand, within AZOBR_RS03065 at 655.629 kb on - strand, within AZOBR_RS03065 at 655.636 kb on - strand, within AZOBR_RS03065 at 655.636 kb on - strand, within AZOBR_RS03065 at 655.920 kb on + strand, within AZOBR_RS03065 at 655.920 kb on + strand, within AZOBR_RS03065 at 656.725 kb on - strand, within AZOBR_RS03075
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.04 mg/ml remove 654,421 + AZOBR_RS03060 0.57 +1.4 654,422 - AZOBR_RS03060 0.57 +1.3 654,422 - AZOBR_RS03060 0.57 -1.8 654,422 - AZOBR_RS03060 0.57 -0.8 655,145 - +0.8 655,525 - AZOBR_RS03065 0.30 -1.2 655,525 - AZOBR_RS03065 0.30 -1.1 655,628 + AZOBR_RS03065 0.42 +1.5 655,628 + AZOBR_RS03065 0.42 +0.2 655,628 + AZOBR_RS03065 0.42 +0.6 655,628 + AZOBR_RS03065 0.42 -1.9 655,629 - AZOBR_RS03065 0.42 -1.5 655,636 - AZOBR_RS03065 0.43 -0.9 655,636 - AZOBR_RS03065 0.43 +0.6 655,920 + AZOBR_RS03065 0.74 -3.6 655,920 + AZOBR_RS03065 0.74 -2.8 656,725 - AZOBR_RS03075 0.46 +2.3
Or see this region's nucleotide sequence