Experiment: Paraquat dichloride 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02355 and AZOBR_RS02360 are separated by 103 nucleotides AZOBR_RS02360 and AZOBR_RS02365 are separated by 191 nucleotides AZOBR_RS02365 and AZOBR_RS02370 are separated by 24 nucleotides AZOBR_RS02370 and AZOBR_RS02375 are separated by 99 nucleotides
AZOBR_RS02355: AZOBR_RS02355 - hypothetical protein, at 485,381 to 485,752
_RS02355
AZOBR_RS02360: AZOBR_RS02360 - hypothetical protein, at 485,856 to 486,371
_RS02360
AZOBR_RS02365: AZOBR_RS02365 - hypothetical protein, at 486,563 to 487,030
_RS02365
AZOBR_RS02370: AZOBR_RS02370 - hypothetical protein, at 487,055 to 487,252
_RS02370
AZOBR_RS02375: AZOBR_RS02375 - rubrerythrin, at 487,352 to 487,885
_RS02375
Position (kb) 485
486
487 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 485.060 kb on - strand at 485.060 kb on - strand at 485.264 kb on + strand at 485.264 kb on + strand at 485.264 kb on + strand at 485.902 kb on + strand at 485.902 kb on + strand at 486.035 kb on - strand, within AZOBR_RS02360 at 486.064 kb on + strand, within AZOBR_RS02360 at 486.065 kb on - strand, within AZOBR_RS02360 at 486.692 kb on - strand, within AZOBR_RS02365 at 486.912 kb on - strand, within AZOBR_RS02365 at 487.174 kb on - strand, within AZOBR_RS02370 at 487.174 kb on - strand, within AZOBR_RS02370 at 487.174 kb on - strand, within AZOBR_RS02370 at 487.174 kb on - strand, within AZOBR_RS02370 at 487.232 kb on - strand, within AZOBR_RS02370 at 487.232 kb on - strand, within AZOBR_RS02370
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.04 mg/ml remove 485,060 - -0.9 485,060 - +0.3 485,264 + -0.6 485,264 + -1.7 485,264 + +0.0 485,902 + -4.0 485,902 + +1.2 486,035 - AZOBR_RS02360 0.35 -0.2 486,064 + AZOBR_RS02360 0.40 -1.5 486,065 - AZOBR_RS02360 0.41 -3.2 486,692 - AZOBR_RS02365 0.28 -0.3 486,912 - AZOBR_RS02365 0.75 +0.1 487,174 - AZOBR_RS02370 0.60 +0.4 487,174 - AZOBR_RS02370 0.60 -0.4 487,174 - AZOBR_RS02370 0.60 +1.9 487,174 - AZOBR_RS02370 0.60 -0.1 487,232 - AZOBR_RS02370 0.89 -1.0 487,232 - AZOBR_RS02370 0.89 +0.2
Or see this region's nucleotide sequence