Experiment: Paraquat dichloride 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02095 and AZOBR_RS02100 are separated by 111 nucleotides
AZOBR_RS02095: AZOBR_RS02095 - hypothetical protein, at 430,046 to 430,396
_RS02095
AZOBR_RS02100: AZOBR_RS02100 - pirin, at 430,508 to 431,440
_RS02100
Position (kb) 430
431 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 429.134 kb on + strand at 429.135 kb on - strand at 429.135 kb on - strand at 429.272 kb on + strand at 429.272 kb on + strand at 429.273 kb on - strand at 429.273 kb on - strand at 429.320 kb on + strand at 429.321 kb on - strand at 429.323 kb on + strand at 429.324 kb on - strand at 429.426 kb on - strand at 429.426 kb on - strand at 429.426 kb on - strand at 429.719 kb on + strand at 429.719 kb on + strand at 429.949 kb on - strand at 430.229 kb on + strand, within AZOBR_RS02095 at 430.271 kb on + strand, within AZOBR_RS02095 at 430.271 kb on + strand, within AZOBR_RS02095 at 430.272 kb on - strand, within AZOBR_RS02095 at 430.286 kb on + strand, within AZOBR_RS02095 at 430.286 kb on + strand, within AZOBR_RS02095 at 430.287 kb on - strand, within AZOBR_RS02095 at 430.352 kb on + strand, within AZOBR_RS02095 at 430.352 kb on + strand, within AZOBR_RS02095 at 430.395 kb on - strand at 430.608 kb on + strand, within AZOBR_RS02100 at 430.671 kb on + strand, within AZOBR_RS02100 at 430.758 kb on + strand, within AZOBR_RS02100 at 430.758 kb on + strand, within AZOBR_RS02100 at 430.758 kb on + strand, within AZOBR_RS02100 at 430.758 kb on + strand, within AZOBR_RS02100 at 430.758 kb on + strand, within AZOBR_RS02100 at 430.758 kb on + strand, within AZOBR_RS02100 at 430.758 kb on + strand, within AZOBR_RS02100 at 430.759 kb on - strand, within AZOBR_RS02100 at 430.759 kb on - strand, within AZOBR_RS02100 at 430.759 kb on - strand, within AZOBR_RS02100 at 430.759 kb on - strand, within AZOBR_RS02100 at 430.759 kb on - strand, within AZOBR_RS02100 at 430.759 kb on - strand, within AZOBR_RS02100 at 431.022 kb on + strand, within AZOBR_RS02100 at 431.022 kb on + strand, within AZOBR_RS02100 at 431.023 kb on - strand, within AZOBR_RS02100 at 431.023 kb on - strand, within AZOBR_RS02100 at 431.023 kb on - strand, within AZOBR_RS02100 at 431.127 kb on + strand, within AZOBR_RS02100 at 431.304 kb on + strand, within AZOBR_RS02100 at 431.304 kb on + strand, within AZOBR_RS02100 at 431.304 kb on + strand, within AZOBR_RS02100 at 431.304 kb on + strand, within AZOBR_RS02100 at 431.305 kb on - strand, within AZOBR_RS02100
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.04 mg/ml remove 429,134 + +0.5 429,135 - -0.6 429,135 - -0.4 429,272 + +1.2 429,272 + +0.1 429,273 - +1.4 429,273 - -0.9 429,320 + -1.0 429,321 - -1.7 429,323 + -1.0 429,324 - -1.3 429,426 - +0.6 429,426 - -0.8 429,426 - -0.6 429,719 + -0.2 429,719 + -0.3 429,949 - +1.8 430,229 + AZOBR_RS02095 0.52 +0.7 430,271 + AZOBR_RS02095 0.64 -0.4 430,271 + AZOBR_RS02095 0.64 +2.4 430,272 - AZOBR_RS02095 0.64 -0.0 430,286 + AZOBR_RS02095 0.68 -0.4 430,286 + AZOBR_RS02095 0.68 -3.0 430,287 - AZOBR_RS02095 0.69 -0.9 430,352 + AZOBR_RS02095 0.87 -0.6 430,352 + AZOBR_RS02095 0.87 -1.0 430,395 - -0.1 430,608 + AZOBR_RS02100 0.11 -0.1 430,671 + AZOBR_RS02100 0.17 +0.1 430,758 + AZOBR_RS02100 0.27 -0.4 430,758 + AZOBR_RS02100 0.27 +1.7 430,758 + AZOBR_RS02100 0.27 +1.9 430,758 + AZOBR_RS02100 0.27 +0.4 430,758 + AZOBR_RS02100 0.27 -1.9 430,758 + AZOBR_RS02100 0.27 +1.4 430,758 + AZOBR_RS02100 0.27 -1.9 430,759 - AZOBR_RS02100 0.27 -2.5 430,759 - AZOBR_RS02100 0.27 -3.3 430,759 - AZOBR_RS02100 0.27 +0.1 430,759 - AZOBR_RS02100 0.27 +0.1 430,759 - AZOBR_RS02100 0.27 +0.3 430,759 - AZOBR_RS02100 0.27 +1.3 431,022 + AZOBR_RS02100 0.55 +0.4 431,022 + AZOBR_RS02100 0.55 -3.1 431,023 - AZOBR_RS02100 0.55 +0.7 431,023 - AZOBR_RS02100 0.55 -0.6 431,023 - AZOBR_RS02100 0.55 -3.3 431,127 + AZOBR_RS02100 0.66 -0.1 431,304 + AZOBR_RS02100 0.85 -0.1 431,304 + AZOBR_RS02100 0.85 -0.5 431,304 + AZOBR_RS02100 0.85 +0.9 431,304 + AZOBR_RS02100 0.85 +0.2 431,305 - AZOBR_RS02100 0.85 -2.7
Or see this region's nucleotide sequence