Experiment: Paraquat dichloride 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02010 and AZOBR_RS02015 are separated by 211 nucleotides AZOBR_RS02015 and AZOBR_RS02020 overlap by 4 nucleotides AZOBR_RS02020 and AZOBR_RS02025 are separated by 3 nucleotides
AZOBR_RS02010: AZOBR_RS02010 - glutamine amidotransferase, at 411,840 to 412,601
_RS02010
AZOBR_RS02015: AZOBR_RS02015 - S-adenosylmethionine decarboxylase, at 412,813 to 413,322
_RS02015
AZOBR_RS02020: AZOBR_RS02020 - spermidine synthase, at 413,319 to 414,179
_RS02020
AZOBR_RS02025: AZOBR_RS02025 - transporter, at 414,183 to 415,673
_RS02025
Position (kb) 412
413
414 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 411.815 kb on + strand at 412.147 kb on + strand, within AZOBR_RS02010 at 412.148 kb on - strand, within AZOBR_RS02010 at 412.192 kb on + strand, within AZOBR_RS02010 at 412.519 kb on + strand, within AZOBR_RS02010 at 412.519 kb on + strand, within AZOBR_RS02010 at 412.519 kb on + strand, within AZOBR_RS02010 at 412.519 kb on + strand, within AZOBR_RS02010 at 412.519 kb on + strand, within AZOBR_RS02010 at 412.519 kb on + strand, within AZOBR_RS02010 at 412.519 kb on + strand, within AZOBR_RS02010 at 412.519 kb on + strand, within AZOBR_RS02010 at 412.519 kb on + strand, within AZOBR_RS02010 at 412.519 kb on + strand, within AZOBR_RS02010 at 412.519 kb on + strand, within AZOBR_RS02010 at 412.519 kb on + strand, within AZOBR_RS02010 at 412.520 kb on - strand, within AZOBR_RS02010 at 412.520 kb on - strand, within AZOBR_RS02010 at 412.520 kb on - strand, within AZOBR_RS02010 at 412.520 kb on - strand, within AZOBR_RS02010 at 412.520 kb on - strand, within AZOBR_RS02010 at 412.520 kb on - strand, within AZOBR_RS02010 at 412.520 kb on - strand, within AZOBR_RS02010 at 412.520 kb on - strand, within AZOBR_RS02010 at 412.758 kb on + strand at 413.361 kb on - strand at 413.847 kb on + strand, within AZOBR_RS02020 at 413.847 kb on + strand, within AZOBR_RS02020 at 413.847 kb on + strand, within AZOBR_RS02020 at 413.847 kb on + strand, within AZOBR_RS02020 at 413.847 kb on + strand, within AZOBR_RS02020 at 413.848 kb on - strand, within AZOBR_RS02020 at 413.848 kb on - strand, within AZOBR_RS02020 at 413.848 kb on - strand, within AZOBR_RS02020 at 414.000 kb on + strand, within AZOBR_RS02020 at 414.000 kb on + strand, within AZOBR_RS02020 at 414.001 kb on - strand, within AZOBR_RS02020 at 414.001 kb on - strand, within AZOBR_RS02020 at 414.001 kb on - strand, within AZOBR_RS02020 at 414.001 kb on - strand, within AZOBR_RS02020 at 414.004 kb on - strand, within AZOBR_RS02020 at 414.114 kb on + strand at 414.114 kb on + strand at 414.115 kb on - strand at 414.115 kb on - strand at 414.178 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.04 mg/ml remove 411,815 + +0.5 412,147 + AZOBR_RS02010 0.40 +0.6 412,148 - AZOBR_RS02010 0.40 -1.3 412,192 + AZOBR_RS02010 0.46 +0.8 412,519 + AZOBR_RS02010 0.89 -1.9 412,519 + AZOBR_RS02010 0.89 -0.4 412,519 + AZOBR_RS02010 0.89 +1.0 412,519 + AZOBR_RS02010 0.89 +1.1 412,519 + AZOBR_RS02010 0.89 -3.4 412,519 + AZOBR_RS02010 0.89 +0.1 412,519 + AZOBR_RS02010 0.89 +0.1 412,519 + AZOBR_RS02010 0.89 -1.8 412,519 + AZOBR_RS02010 0.89 +0.3 412,519 + AZOBR_RS02010 0.89 +0.2 412,519 + AZOBR_RS02010 0.89 +0.5 412,519 + AZOBR_RS02010 0.89 +0.2 412,520 - AZOBR_RS02010 0.89 -1.7 412,520 - AZOBR_RS02010 0.89 -2.4 412,520 - AZOBR_RS02010 0.89 +0.1 412,520 - AZOBR_RS02010 0.89 -0.0 412,520 - AZOBR_RS02010 0.89 +1.3 412,520 - AZOBR_RS02010 0.89 -0.9 412,520 - AZOBR_RS02010 0.89 +2.7 412,520 - AZOBR_RS02010 0.89 +0.4 412,758 + +0.3 413,361 - +0.8 413,847 + AZOBR_RS02020 0.61 -0.6 413,847 + AZOBR_RS02020 0.61 -2.1 413,847 + AZOBR_RS02020 0.61 +0.9 413,847 + AZOBR_RS02020 0.61 -0.9 413,847 + AZOBR_RS02020 0.61 -0.9 413,848 - AZOBR_RS02020 0.61 +0.5 413,848 - AZOBR_RS02020 0.61 -0.7 413,848 - AZOBR_RS02020 0.61 -0.1 414,000 + AZOBR_RS02020 0.79 -1.2 414,000 + AZOBR_RS02020 0.79 +0.0 414,001 - AZOBR_RS02020 0.79 +0.1 414,001 - AZOBR_RS02020 0.79 -0.4 414,001 - AZOBR_RS02020 0.79 +1.4 414,001 - AZOBR_RS02020 0.79 +1.5 414,004 - AZOBR_RS02020 0.80 -3.3 414,114 + -1.2 414,114 + -0.9 414,115 - -0.6 414,115 - -0.4 414,178 - -0.8
Or see this region's nucleotide sequence