Experiment: Paraquat dichloride 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS01355 and AZOBR_RS01360 are separated by 65 nucleotides AZOBR_RS01360 and AZOBR_RS01365 are separated by 0 nucleotides AZOBR_RS01365 and AZOBR_RS01370 are separated by 125 nucleotides
AZOBR_RS01355: AZOBR_RS01355 - glycerophosphoryl diester phosphodiesterase, at 281,738 to 282,487
_RS01355
AZOBR_RS01360: AZOBR_RS01360 - lysine 2 3-aminomutase, at 282,553 to 283,587
_RS01360
AZOBR_RS01365: AZOBR_RS01365 - membrane protein, at 283,588 to 284,142
_RS01365
AZOBR_RS01370: AZOBR_RS01370 - metallopeptidase, at 284,268 to 285,161
_RS01370
Position (kb) 282
283
284 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 281.854 kb on - strand, within AZOBR_RS01355 at 281.854 kb on - strand, within AZOBR_RS01355 at 281.992 kb on - strand, within AZOBR_RS01355 at 281.992 kb on - strand, within AZOBR_RS01355 at 282.502 kb on + strand at 282.519 kb on + strand at 282.519 kb on + strand at 282.523 kb on - strand at 282.644 kb on - strand at 282.664 kb on + strand, within AZOBR_RS01360 at 282.709 kb on + strand, within AZOBR_RS01360 at 282.718 kb on + strand, within AZOBR_RS01360 at 282.743 kb on - strand, within AZOBR_RS01360 at 282.946 kb on + strand, within AZOBR_RS01360 at 282.947 kb on - strand, within AZOBR_RS01360 at 283.342 kb on + strand, within AZOBR_RS01360 at 283.343 kb on - strand, within AZOBR_RS01360 at 283.462 kb on + strand, within AZOBR_RS01360 at 283.463 kb on - strand at 283.463 kb on - strand, within AZOBR_RS01360 at 283.763 kb on + strand, within AZOBR_RS01365 at 283.763 kb on + strand, within AZOBR_RS01365 at 283.812 kb on - strand, within AZOBR_RS01365 at 283.832 kb on + strand, within AZOBR_RS01365 at 283.832 kb on + strand, within AZOBR_RS01365 at 283.832 kb on + strand, within AZOBR_RS01365 at 283.833 kb on - strand, within AZOBR_RS01365 at 284.033 kb on + strand, within AZOBR_RS01365 at 284.033 kb on + strand, within AZOBR_RS01365 at 284.033 kb on + strand, within AZOBR_RS01365 at 284.033 kb on + strand, within AZOBR_RS01365 at 284.034 kb on - strand, within AZOBR_RS01365 at 284.034 kb on - strand, within AZOBR_RS01365 at 284.034 kb on - strand, within AZOBR_RS01365 at 284.076 kb on - strand, within AZOBR_RS01365 at 284.482 kb on - strand, within AZOBR_RS01370
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.04 mg/ml remove 281,854 - AZOBR_RS01355 0.15 -0.4 281,854 - AZOBR_RS01355 0.15 -0.0 281,992 - AZOBR_RS01355 0.34 -1.1 281,992 - AZOBR_RS01355 0.34 -2.0 282,502 + -0.0 282,519 + +0.2 282,519 + +0.3 282,523 - -3.5 282,644 - -0.6 282,664 + AZOBR_RS01360 0.11 -1.4 282,709 + AZOBR_RS01360 0.15 -1.3 282,718 + AZOBR_RS01360 0.16 -0.9 282,743 - AZOBR_RS01360 0.18 -1.1 282,946 + AZOBR_RS01360 0.38 -0.1 282,947 - AZOBR_RS01360 0.38 -0.9 283,342 + AZOBR_RS01360 0.76 -2.4 283,343 - AZOBR_RS01360 0.76 -1.8 283,462 + AZOBR_RS01360 0.88 -1.4 283,463 - +0.4 283,463 - AZOBR_RS01360 0.88 -2.4 283,763 + AZOBR_RS01365 0.32 +0.8 283,763 + AZOBR_RS01365 0.32 -1.9 283,812 - AZOBR_RS01365 0.40 -0.2 283,832 + AZOBR_RS01365 0.44 -0.2 283,832 + AZOBR_RS01365 0.44 -0.3 283,832 + AZOBR_RS01365 0.44 -0.5 283,833 - AZOBR_RS01365 0.44 +1.3 284,033 + AZOBR_RS01365 0.80 +1.1 284,033 + AZOBR_RS01365 0.80 -2.0 284,033 + AZOBR_RS01365 0.80 -1.9 284,033 + AZOBR_RS01365 0.80 -3.1 284,034 - AZOBR_RS01365 0.80 -3.1 284,034 - AZOBR_RS01365 0.80 +0.5 284,034 - AZOBR_RS01365 0.80 +0.0 284,076 - AZOBR_RS01365 0.88 -1.4 284,482 - AZOBR_RS01370 0.24 +0.5
Or see this region's nucleotide sequence