Experiment: Chlorite 0.04 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_29675 and AO356_29680 are separated by 10 nucleotides AO356_29680 and AO356_29685 are separated by 39 nucleotides AO356_29685 and AO356_29690 are separated by 144 nucleotides AO356_29690 and AO356_29695 overlap by 8 nucleotides
AO356_29675: AO356_29675 - ABC transporter permease, at 6,903,583 to 6,904,461
_29675
AO356_29680: AO356_29680 - ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA, at 6,904,472 to 6,905,236
_29680
AO356_29685: AO356_29685 - ABC transporter substrate-binding protein, at 6,905,276 to 6,906,100
_29685
AO356_29690: AO356_29690 - polysaccharide deacetylase, at 6,906,245 to 6,907,087
_29690
AO356_29695: AO356_29695 - polysaccharide deacetylase, at 6,907,080 to 6,907,964
_29695
Position (kb)
6905
6906
6907 Strain fitness (log2 ratio)
-1
0
1 at 6904.504 kb on + strand at 6904.508 kb on + strand at 6905.178 kb on + strand at 6905.181 kb on + strand at 6905.181 kb on + strand at 6905.181 kb on + strand at 6905.184 kb on + strand at 6905.454 kb on - strand, within AO356_29685 at 6905.642 kb on + strand, within AO356_29685 at 6905.906 kb on + strand, within AO356_29685 at 6905.906 kb on + strand, within AO356_29685 at 6905.906 kb on + strand, within AO356_29685 at 6905.907 kb on - strand, within AO356_29685 at 6905.907 kb on - strand, within AO356_29685 at 6905.907 kb on - strand, within AO356_29685 at 6906.704 kb on + strand, within AO356_29690 at 6906.737 kb on + strand, within AO356_29690 at 6906.737 kb on + strand, within AO356_29690 at 6906.737 kb on + strand, within AO356_29690 at 6906.738 kb on - strand, within AO356_29690 at 6906.822 kb on - strand, within AO356_29690 at 6906.860 kb on - strand, within AO356_29690 at 6906.903 kb on - strand, within AO356_29690 at 6906.903 kb on - strand, within AO356_29690 at 6906.964 kb on + strand, within AO356_29690
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.04 mM remove 6,904,504 + -1.3 6,904,508 + -0.1 6,905,178 + +1.1 6,905,181 + -1.5 6,905,181 + -0.2 6,905,181 + -1.0 6,905,184 + -1.6 6,905,454 - AO356_29685 0.22 +0.7 6,905,642 + AO356_29685 0.44 -0.3 6,905,906 + AO356_29685 0.76 -0.7 6,905,906 + AO356_29685 0.76 +0.7 6,905,906 + AO356_29685 0.76 +0.9 6,905,907 - AO356_29685 0.76 -0.1 6,905,907 - AO356_29685 0.76 -0.3 6,905,907 - AO356_29685 0.76 -0.4 6,906,704 + AO356_29690 0.54 +1.1 6,906,737 + AO356_29690 0.58 +1.5 6,906,737 + AO356_29690 0.58 +0.1 6,906,737 + AO356_29690 0.58 +0.2 6,906,738 - AO356_29690 0.58 -0.4 6,906,822 - AO356_29690 0.68 +0.1 6,906,860 - AO356_29690 0.73 +1.6 6,906,903 - AO356_29690 0.78 +0.5 6,906,903 - AO356_29690 0.78 -0.5 6,906,964 + AO356_29690 0.85 -0.5
Or see this region's nucleotide sequence