Experiment: Chlorite 0.04 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_29060 and AO356_29065 are separated by 104 nucleotides AO356_29065 and AO356_29070 are separated by 485 nucleotides
AO356_29060: AO356_29060 - hypothetical protein, at 6,756,962 to 6,757,696
_29060
AO356_29065: AO356_29065 - hypothetical protein, at 6,757,801 to 6,758,931
_29065
AO356_29070: AO356_29070 - succinate-semialdehyde dehydrogenase, at 6,759,417 to 6,760,886
_29070
Position (kb)
6757
6758
6759 Strain fitness (log2 ratio)
-2
-1
0
1 at 6756.827 kb on + strand at 6756.968 kb on - strand at 6756.984 kb on + strand at 6757.025 kb on + strand at 6757.025 kb on + strand at 6757.025 kb on + strand at 6757.025 kb on + strand at 6757.025 kb on + strand at 6757.026 kb on - strand at 6757.026 kb on - strand at 6757.027 kb on + strand at 6757.028 kb on - strand at 6757.028 kb on - strand at 6757.028 kb on - strand at 6757.030 kb on - strand at 6757.030 kb on - strand at 6757.030 kb on - strand at 6757.083 kb on - strand, within AO356_29060 at 6757.136 kb on + strand, within AO356_29060 at 6757.137 kb on - strand, within AO356_29060 at 6757.137 kb on - strand, within AO356_29060 at 6757.187 kb on - strand, within AO356_29060 at 6757.220 kb on + strand, within AO356_29060 at 6757.220 kb on + strand, within AO356_29060 at 6757.299 kb on + strand, within AO356_29060 at 6757.299 kb on + strand, within AO356_29060 at 6757.299 kb on + strand, within AO356_29060 at 6757.475 kb on + strand, within AO356_29060 at 6757.506 kb on - strand, within AO356_29060 at 6757.522 kb on - strand, within AO356_29060 at 6757.530 kb on - strand, within AO356_29060 at 6757.806 kb on + strand at 6757.879 kb on + strand at 6757.963 kb on + strand, within AO356_29065 at 6757.963 kb on + strand, within AO356_29065 at 6757.963 kb on + strand, within AO356_29065 at 6757.964 kb on - strand, within AO356_29065 at 6757.964 kb on - strand, within AO356_29065 at 6757.966 kb on - strand, within AO356_29065 at 6758.153 kb on + strand, within AO356_29065 at 6758.279 kb on + strand, within AO356_29065 at 6758.279 kb on + strand, within AO356_29065 at 6758.279 kb on + strand, within AO356_29065 at 6758.279 kb on + strand, within AO356_29065 at 6758.279 kb on + strand, within AO356_29065 at 6758.279 kb on + strand, within AO356_29065 at 6758.279 kb on + strand, within AO356_29065 at 6758.280 kb on - strand, within AO356_29065 at 6758.280 kb on - strand, within AO356_29065 at 6758.280 kb on - strand, within AO356_29065 at 6758.280 kb on - strand, within AO356_29065 at 6758.280 kb on - strand, within AO356_29065 at 6758.283 kb on + strand, within AO356_29065 at 6758.283 kb on + strand, within AO356_29065 at 6758.283 kb on + strand, within AO356_29065 at 6758.284 kb on - strand, within AO356_29065 at 6758.916 kb on + strand at 6758.917 kb on - strand at 6758.946 kb on - strand at 6759.449 kb on - strand at 6759.449 kb on - strand at 6759.629 kb on - strand, within AO356_29070 at 6759.901 kb on - strand, within AO356_29070 at 6759.901 kb on - strand, within AO356_29070 at 6759.901 kb on - strand, within AO356_29070
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.04 mM remove 6,756,827 + +0.7 6,756,968 - -0.0 6,756,984 + -0.4 6,757,025 + -0.0 6,757,025 + -1.2 6,757,025 + -1.3 6,757,025 + -0.6 6,757,025 + +0.5 6,757,026 - -0.3 6,757,026 - +0.1 6,757,027 + +0.6 6,757,028 - +0.6 6,757,028 - -0.6 6,757,028 - +0.3 6,757,030 - -0.2 6,757,030 - +0.6 6,757,030 - +0.2 6,757,083 - AO356_29060 0.16 +1.3 6,757,136 + AO356_29060 0.24 +0.2 6,757,137 - AO356_29060 0.24 -1.0 6,757,137 - AO356_29060 0.24 +0.3 6,757,187 - AO356_29060 0.31 -0.0 6,757,220 + AO356_29060 0.35 -2.4 6,757,220 + AO356_29060 0.35 -1.1 6,757,299 + AO356_29060 0.46 -1.1 6,757,299 + AO356_29060 0.46 +0.7 6,757,299 + AO356_29060 0.46 -1.7 6,757,475 + AO356_29060 0.70 -0.4 6,757,506 - AO356_29060 0.74 -1.0 6,757,522 - AO356_29060 0.76 -0.6 6,757,530 - AO356_29060 0.77 -0.5 6,757,806 + -0.0 6,757,879 + +0.3 6,757,963 + AO356_29065 0.14 -1.6 6,757,963 + AO356_29065 0.14 -0.5 6,757,963 + AO356_29065 0.14 +0.1 6,757,964 - AO356_29065 0.14 -0.2 6,757,964 - AO356_29065 0.14 +0.7 6,757,966 - AO356_29065 0.15 -0.4 6,758,153 + AO356_29065 0.31 +0.8 6,758,279 + AO356_29065 0.42 +0.3 6,758,279 + AO356_29065 0.42 -0.4 6,758,279 + AO356_29065 0.42 +1.0 6,758,279 + AO356_29065 0.42 +0.8 6,758,279 + AO356_29065 0.42 -0.1 6,758,279 + AO356_29065 0.42 -0.4 6,758,279 + AO356_29065 0.42 +0.5 6,758,280 - AO356_29065 0.42 -0.4 6,758,280 - AO356_29065 0.42 +1.7 6,758,280 - AO356_29065 0.42 -0.0 6,758,280 - AO356_29065 0.42 -0.2 6,758,280 - AO356_29065 0.42 -0.3 6,758,283 + AO356_29065 0.43 -0.8 6,758,283 + AO356_29065 0.43 -0.5 6,758,283 + AO356_29065 0.43 +0.5 6,758,284 - AO356_29065 0.43 +0.1 6,758,916 + +0.2 6,758,917 - -1.0 6,758,946 - -1.6 6,759,449 - -0.0 6,759,449 - -0.8 6,759,629 - AO356_29070 0.14 -0.2 6,759,901 - AO356_29070 0.33 +0.9 6,759,901 - AO356_29070 0.33 +0.7 6,759,901 - AO356_29070 0.33 +0.1
Or see this region's nucleotide sequence