Experiment: Chlorite 0.04 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_28310 and AO356_28315 are separated by 95 nucleotides AO356_28315 and AO356_28320 are separated by 410 nucleotides
AO356_28310: AO356_28310 - coproporphyrinogen III oxidase, at 6,577,742 to 6,579,115
_28310
AO356_28315: AO356_28315 - hypothetical protein, at 6,579,211 to 6,579,654
_28315
AO356_28320: AO356_28320 - mannuronan epimerase, at 6,580,065 to 6,585,677
_28320
Position (kb)
6579
6580 Strain fitness (log2 ratio)
-1
0
1 at 6578.268 kb on + strand, within AO356_28310 at 6578.268 kb on + strand, within AO356_28310 at 6578.268 kb on + strand, within AO356_28310 at 6578.268 kb on + strand, within AO356_28310 at 6578.268 kb on + strand, within AO356_28310 at 6578.268 kb on + strand, within AO356_28310 at 6578.268 kb on + strand, within AO356_28310 at 6578.269 kb on - strand, within AO356_28310 at 6578.269 kb on - strand, within AO356_28310 at 6578.710 kb on - strand, within AO356_28310 at 6579.180 kb on + strand at 6579.180 kb on + strand at 6579.180 kb on + strand at 6579.212 kb on + strand at 6579.224 kb on + strand at 6579.224 kb on + strand at 6579.225 kb on - strand at 6579.225 kb on - strand at 6579.225 kb on - strand at 6579.225 kb on - strand at 6579.225 kb on - strand at 6579.297 kb on - strand, within AO356_28315 at 6579.297 kb on - strand, within AO356_28315 at 6579.435 kb on - strand, within AO356_28315 at 6579.937 kb on - strand at 6580.176 kb on + strand at 6580.176 kb on + strand at 6580.176 kb on + strand at 6580.176 kb on + strand at 6580.177 kb on - strand at 6580.177 kb on - strand at 6580.177 kb on - strand at 6580.177 kb on - strand at 6580.177 kb on - strand at 6580.177 kb on - strand at 6580.177 kb on - strand at 6580.177 kb on - strand at 6580.177 kb on - strand at 6580.194 kb on + strand at 6580.194 kb on + strand at 6580.194 kb on + strand at 6580.194 kb on + strand at 6580.195 kb on - strand at 6580.195 kb on - strand at 6580.254 kb on + strand at 6580.254 kb on + strand at 6580.255 kb on - strand at 6580.437 kb on + strand at 6580.459 kb on - strand at 6580.636 kb on - strand, within AO356_28320 at 6580.636 kb on - strand, within AO356_28320 at 6580.636 kb on - strand, within AO356_28320
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.04 mM remove 6,578,268 + AO356_28310 0.38 +0.1 6,578,268 + AO356_28310 0.38 +0.0 6,578,268 + AO356_28310 0.38 -0.6 6,578,268 + AO356_28310 0.38 +0.2 6,578,268 + AO356_28310 0.38 -0.9 6,578,268 + AO356_28310 0.38 +0.4 6,578,268 + AO356_28310 0.38 -0.4 6,578,269 - AO356_28310 0.38 +0.5 6,578,269 - AO356_28310 0.38 +1.7 6,578,710 - AO356_28310 0.70 -1.6 6,579,180 + +0.6 6,579,180 + +0.6 6,579,180 + +0.4 6,579,212 + -0.5 6,579,224 + +0.0 6,579,224 + -0.0 6,579,225 - +0.9 6,579,225 - -1.4 6,579,225 - +0.3 6,579,225 - +0.1 6,579,225 - -0.2 6,579,297 - AO356_28315 0.19 -1.0 6,579,297 - AO356_28315 0.19 +0.2 6,579,435 - AO356_28315 0.50 +0.4 6,579,937 - +0.3 6,580,176 + +0.5 6,580,176 + +0.9 6,580,176 + +0.3 6,580,176 + +0.8 6,580,177 - +0.2 6,580,177 - +0.5 6,580,177 - +0.2 6,580,177 - -0.5 6,580,177 - +1.2 6,580,177 - +0.1 6,580,177 - -1.4 6,580,177 - -0.4 6,580,177 - -0.5 6,580,194 + -0.3 6,580,194 + +0.2 6,580,194 + -0.5 6,580,194 + -0.2 6,580,195 - +0.3 6,580,195 - -0.2 6,580,254 + +0.3 6,580,254 + +0.9 6,580,255 - -0.2 6,580,437 + +0.3 6,580,459 - +0.3 6,580,636 - AO356_28320 0.10 +0.8 6,580,636 - AO356_28320 0.10 -0.3 6,580,636 - AO356_28320 0.10 -0.7
Or see this region's nucleotide sequence