Experiment: Chlorite 0.04 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_28220 and AO356_28225 are separated by 385 nucleotides
AO356_28220: AO356_28220 - non-ribosomal peptide synthetase, at 6,495,382 to 6,521,169
_28220
AO356_28225: AO356_28225 - ATP-binding protein, at 6,521,555 to 6,523,255
_28225
Position (kb)
6496
6498
6500
6502
6504
6506
6508
6510
6512
6514
6516
6518
6520
6522 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6494.397 kb on + strand at 6494.504 kb on - strand at 6494.745 kb on - strand at 6495.215 kb on + strand at 6495.215 kb on + strand at 6495.252 kb on + strand at 6495.737 kb on + strand at 6495.813 kb on - strand at 6496.010 kb on + strand at 6496.051 kb on - strand at 6496.115 kb on + strand at 6496.115 kb on + strand at 6496.115 kb on + strand at 6496.116 kb on - strand at 6496.116 kb on - strand at 6496.116 kb on - strand at 6496.247 kb on + strand at 6496.248 kb on - strand at 6496.280 kb on + strand at 6496.281 kb on - strand at 6496.281 kb on - strand at 6496.713 kb on - strand at 6496.887 kb on - strand at 6496.925 kb on - strand at 6497.316 kb on + strand at 6497.316 kb on + strand at 6497.317 kb on - strand at 6498.158 kb on + strand, within AO356_28220 at 6498.159 kb on - strand, within AO356_28220 at 6498.440 kb on + strand, within AO356_28220 at 6498.507 kb on - strand, within AO356_28220 at 6498.841 kb on - strand, within AO356_28220 at 6498.995 kb on + strand, within AO356_28220 at 6499.512 kb on - strand, within AO356_28220 at 6500.397 kb on - strand, within AO356_28220 at 6501.340 kb on - strand, within AO356_28220 at 6501.605 kb on + strand, within AO356_28220 at 6501.740 kb on + strand, within AO356_28220 at 6502.115 kb on + strand, within AO356_28220 at 6502.130 kb on + strand, within AO356_28220 at 6502.307 kb on + strand, within AO356_28220 at 6502.307 kb on + strand, within AO356_28220 at 6502.457 kb on + strand, within AO356_28220 at 6502.457 kb on + strand, within AO356_28220 at 6502.664 kb on + strand, within AO356_28220 at 6502.893 kb on - strand, within AO356_28220 at 6503.192 kb on + strand, within AO356_28220 at 6503.385 kb on - strand, within AO356_28220 at 6503.385 kb on - strand, within AO356_28220 at 6503.659 kb on + strand, within AO356_28220 at 6503.763 kb on - strand, within AO356_28220 at 6503.838 kb on + strand, within AO356_28220 at 6503.862 kb on + strand, within AO356_28220 at 6503.863 kb on - strand, within AO356_28220 at 6504.461 kb on + strand, within AO356_28220 at 6504.462 kb on - strand, within AO356_28220 at 6504.900 kb on - strand, within AO356_28220 at 6505.454 kb on + strand, within AO356_28220 at 6505.454 kb on + strand, within AO356_28220 at 6505.967 kb on + strand, within AO356_28220 at 6506.396 kb on + strand, within AO356_28220 at 6506.750 kb on + strand, within AO356_28220 at 6507.028 kb on - strand, within AO356_28220 at 6507.330 kb on + strand, within AO356_28220 at 6507.458 kb on + strand, within AO356_28220 at 6507.458 kb on + strand, within AO356_28220 at 6507.678 kb on - strand, within AO356_28220 at 6507.678 kb on - strand, within AO356_28220 at 6507.900 kb on - strand, within AO356_28220 at 6508.115 kb on + strand, within AO356_28220 at 6508.148 kb on + strand, within AO356_28220 at 6508.156 kb on - strand, within AO356_28220 at 6508.156 kb on - strand, within AO356_28220 at 6508.653 kb on - strand, within AO356_28220 at 6508.653 kb on - strand, within AO356_28220 at 6508.749 kb on - strand, within AO356_28220 at 6508.840 kb on + strand, within AO356_28220 at 6509.520 kb on + strand, within AO356_28220 at 6509.610 kb on - strand, within AO356_28220 at 6509.610 kb on - strand, within AO356_28220 at 6509.618 kb on + strand, within AO356_28220 at 6509.619 kb on - strand, within AO356_28220 at 6509.783 kb on + strand, within AO356_28220 at 6509.973 kb on - strand, within AO356_28220 at 6510.068 kb on + strand, within AO356_28220 at 6510.069 kb on - strand, within AO356_28220 at 6510.297 kb on - strand, within AO356_28220 at 6510.322 kb on + strand, within AO356_28220 at 6510.902 kb on + strand, within AO356_28220 at 6510.902 kb on + strand, within AO356_28220 at 6511.341 kb on - strand, within AO356_28220 at 6511.406 kb on + strand, within AO356_28220 at 6511.407 kb on - strand, within AO356_28220 at 6511.606 kb on + strand, within AO356_28220 at 6511.606 kb on + strand, within AO356_28220 at 6511.607 kb on - strand, within AO356_28220 at 6511.895 kb on + strand, within AO356_28220 at 6512.175 kb on + strand, within AO356_28220 at 6512.175 kb on + strand, within AO356_28220 at 6513.515 kb on + strand, within AO356_28220 at 6513.574 kb on + strand, within AO356_28220 at 6514.121 kb on + strand, within AO356_28220 at 6514.121 kb on + strand, within AO356_28220 at 6514.559 kb on + strand, within AO356_28220 at 6514.593 kb on - strand, within AO356_28220 at 6514.625 kb on + strand, within AO356_28220 at 6514.626 kb on - strand, within AO356_28220 at 6514.823 kb on - strand, within AO356_28220 at 6514.823 kb on - strand, within AO356_28220 at 6514.826 kb on - strand, within AO356_28220 at 6516.640 kb on - strand, within AO356_28220 at 6517.277 kb on - strand, within AO356_28220 at 6517.277 kb on - strand, within AO356_28220 at 6517.349 kb on + strand, within AO356_28220 at 6517.737 kb on + strand, within AO356_28220 at 6517.737 kb on + strand, within AO356_28220 at 6517.787 kb on + strand, within AO356_28220 at 6517.821 kb on - strand, within AO356_28220 at 6517.853 kb on + strand, within AO356_28220 at 6517.854 kb on - strand, within AO356_28220 at 6518.228 kb on + strand, within AO356_28220 at 6518.243 kb on + strand, within AO356_28220 at 6518.342 kb on + strand, within AO356_28220 at 6518.343 kb on - strand, within AO356_28220 at 6518.343 kb on - strand, within AO356_28220 at 6518.417 kb on + strand, within AO356_28220 at 6518.418 kb on - strand, within AO356_28220 at 6518.418 kb on - strand, within AO356_28220 at 6518.720 kb on + strand at 6518.721 kb on - strand at 6518.853 kb on - strand at 6518.853 kb on - strand at 6518.885 kb on + strand at 6518.886 kb on - strand at 6519.317 kb on + strand at 6519.317 kb on + strand at 6519.318 kb on - strand at 6519.318 kb on - strand at 6519.318 kb on - strand at 6519.318 kb on - strand at 6519.318 kb on - strand at 6519.318 kb on - strand at 6519.689 kb on + strand at 6519.785 kb on + strand at 6519.786 kb on - strand at 6519.786 kb on - strand at 6519.786 kb on - strand at 6519.871 kb on - strand at 6519.871 kb on - strand at 6519.956 kb on + strand at 6519.957 kb on - strand at 6521.057 kb on + strand at 6521.072 kb on + strand at 6521.072 kb on + strand at 6521.169 kb on + strand at 6521.169 kb on + strand at 6521.824 kb on - strand, within AO356_28225 at 6521.848 kb on - strand, within AO356_28225 at 6522.064 kb on - strand, within AO356_28225 at 6522.064 kb on - strand, within AO356_28225 at 6522.124 kb on - strand, within AO356_28225 at 6522.124 kb on - strand, within AO356_28225
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.04 mM remove 6,494,397 + +0.1 6,494,504 - +1.1 6,494,745 - +0.1 6,495,215 + -0.2 6,495,215 + +0.7 6,495,252 + +0.6 6,495,737 + +0.2 6,495,813 - +0.4 6,496,010 + -0.1 6,496,051 - +0.7 6,496,115 + +1.6 6,496,115 + +0.6 6,496,115 + +1.4 6,496,116 - -0.9 6,496,116 - +0.8 6,496,116 - +1.2 6,496,247 + +1.8 6,496,248 - +1.6 6,496,280 + -0.7 6,496,281 - +0.3 6,496,281 - +0.4 6,496,713 - -0.6 6,496,887 - +0.4 6,496,925 - -0.7 6,497,316 + +1.4 6,497,316 + -0.5 6,497,317 - -0.6 6,498,158 + AO356_28220 0.11 +0.1 6,498,159 - AO356_28220 0.11 +0.1 6,498,440 + AO356_28220 0.12 -0.2 6,498,507 - AO356_28220 0.12 -0.0 6,498,841 - AO356_28220 0.13 -0.2 6,498,995 + AO356_28220 0.14 -0.2 6,499,512 - AO356_28220 0.16 -0.2 6,500,397 - AO356_28220 0.19 +0.5 6,501,340 - AO356_28220 0.23 +0.1 6,501,605 + AO356_28220 0.24 +0.6 6,501,740 + AO356_28220 0.25 -1.6 6,502,115 + AO356_28220 0.26 -0.1 6,502,130 + AO356_28220 0.26 +0.7 6,502,307 + AO356_28220 0.27 +1.6 6,502,307 + AO356_28220 0.27 -0.6 6,502,457 + AO356_28220 0.27 -0.1 6,502,457 + AO356_28220 0.27 -0.8 6,502,664 + AO356_28220 0.28 +1.1 6,502,893 - AO356_28220 0.29 -0.2 6,503,192 + AO356_28220 0.30 +0.6 6,503,385 - AO356_28220 0.31 +0.2 6,503,385 - AO356_28220 0.31 -0.6 6,503,659 + AO356_28220 0.32 -1.3 6,503,763 - AO356_28220 0.32 +0.4 6,503,838 + AO356_28220 0.33 +0.2 6,503,862 + AO356_28220 0.33 -1.6 6,503,863 - AO356_28220 0.33 +1.3 6,504,461 + AO356_28220 0.35 +0.7 6,504,462 - AO356_28220 0.35 +0.9 6,504,900 - AO356_28220 0.37 -2.3 6,505,454 + AO356_28220 0.39 -0.4 6,505,454 + AO356_28220 0.39 -0.2 6,505,967 + AO356_28220 0.41 +0.9 6,506,396 + AO356_28220 0.43 +1.2 6,506,750 + AO356_28220 0.44 +0.1 6,507,028 - AO356_28220 0.45 +0.1 6,507,330 + AO356_28220 0.46 -0.1 6,507,458 + AO356_28220 0.47 +1.2 6,507,458 + AO356_28220 0.47 +0.6 6,507,678 - AO356_28220 0.48 -0.3 6,507,678 - AO356_28220 0.48 +0.6 6,507,900 - AO356_28220 0.49 -1.5 6,508,115 + AO356_28220 0.49 +0.1 6,508,148 + AO356_28220 0.50 +0.9 6,508,156 - AO356_28220 0.50 -1.4 6,508,156 - AO356_28220 0.50 +0.1 6,508,653 - AO356_28220 0.51 +1.2 6,508,653 - AO356_28220 0.51 -2.8 6,508,749 - AO356_28220 0.52 +0.3 6,508,840 + AO356_28220 0.52 -0.3 6,509,520 + AO356_28220 0.55 +0.3 6,509,610 - AO356_28220 0.55 +0.3 6,509,610 - AO356_28220 0.55 +0.6 6,509,618 + AO356_28220 0.55 -0.2 6,509,619 - AO356_28220 0.55 -0.5 6,509,783 + AO356_28220 0.56 +0.2 6,509,973 - AO356_28220 0.57 +0.1 6,510,068 + AO356_28220 0.57 +0.1 6,510,069 - AO356_28220 0.57 +0.3 6,510,297 - AO356_28220 0.58 -0.4 6,510,322 + AO356_28220 0.58 -1.0 6,510,902 + AO356_28220 0.60 +1.2 6,510,902 + AO356_28220 0.60 +1.1 6,511,341 - AO356_28220 0.62 +1.6 6,511,406 + AO356_28220 0.62 +0.3 6,511,407 - AO356_28220 0.62 -0.4 6,511,606 + AO356_28220 0.63 +0.4 6,511,606 + AO356_28220 0.63 +0.4 6,511,607 - AO356_28220 0.63 +1.7 6,511,895 + AO356_28220 0.64 -0.1 6,512,175 + AO356_28220 0.65 +0.5 6,512,175 + AO356_28220 0.65 +1.1 6,513,515 + AO356_28220 0.70 +1.6 6,513,574 + AO356_28220 0.71 +1.3 6,514,121 + AO356_28220 0.73 -0.6 6,514,121 + AO356_28220 0.73 +2.1 6,514,559 + AO356_28220 0.74 -1.1 6,514,593 - AO356_28220 0.74 +1.5 6,514,625 + AO356_28220 0.75 +0.6 6,514,626 - AO356_28220 0.75 -1.2 6,514,823 - AO356_28220 0.75 +0.4 6,514,823 - AO356_28220 0.75 +0.1 6,514,826 - AO356_28220 0.75 +0.5 6,516,640 - AO356_28220 0.82 +0.5 6,517,277 - AO356_28220 0.85 +1.1 6,517,277 - AO356_28220 0.85 -0.7 6,517,349 + AO356_28220 0.85 +0.5 6,517,737 + AO356_28220 0.87 +0.9 6,517,737 + AO356_28220 0.87 -0.5 6,517,787 + AO356_28220 0.87 +0.3 6,517,821 - AO356_28220 0.87 +0.5 6,517,853 + AO356_28220 0.87 +1.1 6,517,854 - AO356_28220 0.87 -0.2 6,518,228 + AO356_28220 0.89 -0.7 6,518,243 + AO356_28220 0.89 +1.9 6,518,342 + AO356_28220 0.89 +0.9 6,518,343 - AO356_28220 0.89 +0.3 6,518,343 - AO356_28220 0.89 +0.2 6,518,417 + AO356_28220 0.89 -2.2 6,518,418 - AO356_28220 0.89 -0.1 6,518,418 - AO356_28220 0.89 -0.4 6,518,720 + +1.0 6,518,721 - -0.2 6,518,853 - -0.6 6,518,853 - +0.2 6,518,885 + +0.8 6,518,886 - -0.3 6,519,317 + +1.6 6,519,317 + +0.5 6,519,318 - -1.9 6,519,318 - -0.2 6,519,318 - -1.2 6,519,318 - +0.1 6,519,318 - -0.7 6,519,318 - +1.3 6,519,689 + +0.5 6,519,785 + +0.3 6,519,786 - +1.4 6,519,786 - -0.2 6,519,786 - -0.7 6,519,871 - -0.5 6,519,871 - -0.5 6,519,956 + +0.5 6,519,957 - -1.5 6,521,057 + -0.5 6,521,072 + +0.6 6,521,072 + +0.3 6,521,169 + -0.2 6,521,169 + -1.1 6,521,824 - AO356_28225 0.16 +0.2 6,521,848 - AO356_28225 0.17 +0.8 6,522,064 - AO356_28225 0.30 -0.2 6,522,064 - AO356_28225 0.30 +1.1 6,522,124 - AO356_28225 0.33 +1.3 6,522,124 - AO356_28225 0.33 -1.5
Or see this region's nucleotide sequence