Experiment: Chlorite 0.04 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27265 and AO356_27270 are separated by 95 nucleotides AO356_27270 and AO356_27275 are separated by 144 nucleotides
AO356_27265: AO356_27265 - hypothetical protein, at 6,214,792 to 6,215,751
_27265
AO356_27270: AO356_27270 - MFS transporter, at 6,215,847 to 6,217,265
_27270
AO356_27275: AO356_27275 - histidine kinase, at 6,217,410 to 6,218,834
_27275
Position (kb)
6215
6216
6217
6218 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6215.243 kb on + strand, within AO356_27265 at 6215.243 kb on + strand, within AO356_27265 at 6215.444 kb on - strand, within AO356_27265 at 6215.444 kb on - strand, within AO356_27265 at 6215.463 kb on + strand, within AO356_27265 at 6215.464 kb on - strand, within AO356_27265 at 6215.464 kb on - strand, within AO356_27265 at 6215.526 kb on + strand, within AO356_27265 at 6215.526 kb on + strand, within AO356_27265 at 6215.548 kb on + strand, within AO356_27265 at 6215.620 kb on + strand, within AO356_27265 at 6215.657 kb on + strand at 6215.700 kb on - strand at 6215.700 kb on - strand at 6215.700 kb on - strand at 6215.776 kb on + strand at 6215.776 kb on + strand at 6215.776 kb on + strand at 6215.777 kb on - strand at 6215.855 kb on + strand at 6215.855 kb on + strand at 6215.856 kb on - strand at 6215.925 kb on + strand at 6215.968 kb on + strand at 6216.010 kb on - strand, within AO356_27270 at 6216.468 kb on + strand, within AO356_27270 at 6216.469 kb on - strand, within AO356_27270 at 6216.469 kb on - strand, within AO356_27270 at 6216.529 kb on + strand, within AO356_27270 at 6216.542 kb on - strand, within AO356_27270 at 6216.552 kb on + strand, within AO356_27270 at 6216.553 kb on - strand, within AO356_27270 at 6216.556 kb on - strand, within AO356_27270 at 6216.687 kb on - strand, within AO356_27270 at 6216.687 kb on - strand, within AO356_27270 at 6216.720 kb on + strand, within AO356_27270 at 6216.721 kb on - strand, within AO356_27270 at 6216.721 kb on - strand, within AO356_27270 at 6216.764 kb on + strand, within AO356_27270 at 6216.764 kb on + strand, within AO356_27270 at 6216.765 kb on - strand, within AO356_27270 at 6216.765 kb on - strand, within AO356_27270 at 6216.765 kb on - strand, within AO356_27270 at 6216.765 kb on - strand, within AO356_27270 at 6216.765 kb on - strand, within AO356_27270 at 6216.765 kb on - strand, within AO356_27270 at 6216.787 kb on + strand, within AO356_27270 at 6216.895 kb on + strand, within AO356_27270 at 6217.183 kb on + strand at 6217.183 kb on + strand at 6217.183 kb on + strand at 6217.184 kb on - strand at 6217.184 kb on - strand at 6217.257 kb on + strand at 6217.257 kb on + strand at 6217.258 kb on - strand at 6217.258 kb on - strand at 6217.411 kb on + strand at 6217.459 kb on + strand at 6217.460 kb on - strand at 6217.498 kb on - strand at 6217.498 kb on - strand at 6217.498 kb on - strand at 6217.520 kb on - strand at 6217.551 kb on - strand at 6217.560 kb on + strand, within AO356_27275 at 6217.561 kb on - strand, within AO356_27275 at 6217.561 kb on - strand, within AO356_27275 at 6217.698 kb on - strand, within AO356_27275 at 6217.909 kb on + strand, within AO356_27275 at 6217.909 kb on + strand, within AO356_27275 at 6217.910 kb on - strand, within AO356_27275 at 6218.130 kb on + strand, within AO356_27275 at 6218.130 kb on + strand, within AO356_27275 at 6218.208 kb on + strand, within AO356_27275
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.04 mM remove 6,215,243 + AO356_27265 0.47 +0.9 6,215,243 + AO356_27265 0.47 -1.2 6,215,444 - AO356_27265 0.68 +1.5 6,215,444 - AO356_27265 0.68 +0.4 6,215,463 + AO356_27265 0.70 +1.2 6,215,464 - AO356_27265 0.70 +1.0 6,215,464 - AO356_27265 0.70 -0.5 6,215,526 + AO356_27265 0.76 -0.6 6,215,526 + AO356_27265 0.76 -0.1 6,215,548 + AO356_27265 0.79 -1.8 6,215,620 + AO356_27265 0.86 -0.0 6,215,657 + -1.2 6,215,700 - +1.3 6,215,700 - +0.9 6,215,700 - +0.2 6,215,776 + -0.3 6,215,776 + -0.6 6,215,776 + +1.0 6,215,777 - +0.9 6,215,855 + +0.2 6,215,855 + +0.7 6,215,856 - +1.0 6,215,925 + -0.2 6,215,968 + +1.1 6,216,010 - AO356_27270 0.11 -1.5 6,216,468 + AO356_27270 0.44 -0.3 6,216,469 - AO356_27270 0.44 +0.4 6,216,469 - AO356_27270 0.44 -1.4 6,216,529 + AO356_27270 0.48 -0.9 6,216,542 - AO356_27270 0.49 +0.6 6,216,552 + AO356_27270 0.50 -1.4 6,216,553 - AO356_27270 0.50 +1.4 6,216,556 - AO356_27270 0.50 +1.0 6,216,687 - AO356_27270 0.59 +0.2 6,216,687 - AO356_27270 0.59 -0.4 6,216,720 + AO356_27270 0.62 +0.1 6,216,721 - AO356_27270 0.62 +0.9 6,216,721 - AO356_27270 0.62 +0.3 6,216,764 + AO356_27270 0.65 +0.4 6,216,764 + AO356_27270 0.65 -0.8 6,216,765 - AO356_27270 0.65 +0.5 6,216,765 - AO356_27270 0.65 -0.2 6,216,765 - AO356_27270 0.65 +0.2 6,216,765 - AO356_27270 0.65 -0.5 6,216,765 - AO356_27270 0.65 -0.9 6,216,765 - AO356_27270 0.65 -0.3 6,216,787 + AO356_27270 0.66 -0.8 6,216,895 + AO356_27270 0.74 +0.1 6,217,183 + +0.2 6,217,183 + -0.7 6,217,183 + -1.0 6,217,184 - +0.0 6,217,184 - +1.0 6,217,257 + +0.2 6,217,257 + -1.3 6,217,258 - +0.5 6,217,258 - +0.3 6,217,411 + +2.5 6,217,459 + +0.1 6,217,460 - +0.2 6,217,498 - +0.4 6,217,498 - -0.0 6,217,498 - +0.4 6,217,520 - +0.0 6,217,551 - +0.0 6,217,560 + AO356_27275 0.11 +0.1 6,217,561 - AO356_27275 0.11 +0.3 6,217,561 - AO356_27275 0.11 -0.1 6,217,698 - AO356_27275 0.20 +0.7 6,217,909 + AO356_27275 0.35 +1.1 6,217,909 + AO356_27275 0.35 +0.7 6,217,910 - AO356_27275 0.35 -2.0 6,218,130 + AO356_27275 0.51 +0.2 6,218,130 + AO356_27275 0.51 +0.6 6,218,208 + AO356_27275 0.56 -0.5
Or see this region's nucleotide sequence