Experiment: Chlorite 0.04 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_23990 and AO356_23995 are separated by 55 nucleotides AO356_23995 and AO356_24000 overlap by 4 nucleotides AO356_24000 and AO356_24005 overlap by 4 nucleotides
AO356_23990: AO356_23990 - amino acid ABC transporter, at 5,378,861 to 5,379,703
_23990
AO356_23995: AO356_23995 - amino acid ABC transporter, at 5,379,759 to 5,380,610
_23995
AO356_24000: AO356_24000 - hydroxyacid dehydrogenase, at 5,380,607 to 5,382,031
_24000
AO356_24005: AO356_24005 - aspartate aminotransferase, at 5,382,028 to 5,383,239
_24005
Position (kb) 5380
5381
5382
5383 Strain fitness (log2 ratio) -2
-1
0
1 at 5379.930 kb on - strand, within AO356_23995 at 5379.952 kb on - strand, within AO356_23995 at 5380.113 kb on + strand, within AO356_23995 at 5380.129 kb on - strand, within AO356_23995 at 5380.254 kb on + strand, within AO356_23995 at 5380.254 kb on + strand, within AO356_23995 at 5380.576 kb on - strand at 5380.576 kb on - strand at 5380.576 kb on - strand at 5380.710 kb on - strand at 5380.830 kb on + strand, within AO356_24000 at 5380.830 kb on + strand, within AO356_24000 at 5380.831 kb on - strand, within AO356_24000 at 5381.651 kb on - strand, within AO356_24000 at 5381.651 kb on - strand, within AO356_24000 at 5381.735 kb on + strand, within AO356_24000 at 5381.736 kb on - strand, within AO356_24000 at 5381.736 kb on - strand, within AO356_24000 at 5381.736 kb on - strand, within AO356_24000 at 5381.771 kb on + strand, within AO356_24000 at 5381.771 kb on + strand, within AO356_24000 at 5381.771 kb on + strand, within AO356_24000 at 5381.772 kb on - strand, within AO356_24000 at 5381.772 kb on - strand, within AO356_24000 at 5381.822 kb on + strand, within AO356_24000 at 5382.037 kb on + strand at 5382.037 kb on + strand at 5382.038 kb on - strand at 5382.571 kb on + strand, within AO356_24005 at 5382.657 kb on + strand, within AO356_24005 at 5382.658 kb on - strand, within AO356_24005 at 5382.658 kb on - strand, within AO356_24005 at 5382.658 kb on - strand, within AO356_24005 at 5382.751 kb on + strand, within AO356_24005 at 5382.751 kb on + strand, within AO356_24005 at 5382.923 kb on - strand, within AO356_24005
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.04 mM remove 5,379,930 - AO356_23995 0.20 -0.7 5,379,952 - AO356_23995 0.23 -0.4 5,380,113 + AO356_23995 0.42 -2.4 5,380,129 - AO356_23995 0.43 +0.5 5,380,254 + AO356_23995 0.58 -0.7 5,380,254 + AO356_23995 0.58 -0.8 5,380,576 - +0.8 5,380,576 - -0.2 5,380,576 - -2.0 5,380,710 - -2.6 5,380,830 + AO356_24000 0.16 +0.8 5,380,830 + AO356_24000 0.16 -0.8 5,380,831 - AO356_24000 0.16 -0.3 5,381,651 - AO356_24000 0.73 +0.6 5,381,651 - AO356_24000 0.73 -0.2 5,381,735 + AO356_24000 0.79 -1.0 5,381,736 - AO356_24000 0.79 +0.6 5,381,736 - AO356_24000 0.79 +0.0 5,381,736 - AO356_24000 0.79 -0.9 5,381,771 + AO356_24000 0.82 +0.1 5,381,771 + AO356_24000 0.82 +0.5 5,381,771 + AO356_24000 0.82 +0.4 5,381,772 - AO356_24000 0.82 +0.7 5,381,772 - AO356_24000 0.82 -0.5 5,381,822 + AO356_24000 0.85 -0.4 5,382,037 + +1.2 5,382,037 + +0.3 5,382,038 - +0.5 5,382,571 + AO356_24005 0.45 +0.3 5,382,657 + AO356_24005 0.52 -0.0 5,382,658 - AO356_24005 0.52 +0.5 5,382,658 - AO356_24005 0.52 -0.2 5,382,658 - AO356_24005 0.52 -0.5 5,382,751 + AO356_24005 0.60 +0.5 5,382,751 + AO356_24005 0.60 +0.5 5,382,923 - AO356_24005 0.74 -0.6
Or see this region's nucleotide sequence