Experiment: Chlorite 0.04 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22125 and AO356_22130 are separated by 295 nucleotides AO356_22130 and AO356_22135 overlap by 2 nucleotides
AO356_22125: AO356_22125 - isocitrate dehydrogenase, at 4,952,568 to 4,954,793
_22125
AO356_22130: AO356_22130 - hypothetical protein, at 4,955,089 to 4,955,277
_22130
AO356_22135: AO356_22135 - isocitrate dehydrogenase, at 4,955,276 to 4,956,532
_22135
Position (kb)
4955
4956 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4954.146 kb on + strand, within AO356_22125 at 4954.146 kb on + strand, within AO356_22125 at 4954.147 kb on - strand, within AO356_22125 at 4954.147 kb on - strand, within AO356_22125 at 4954.275 kb on + strand, within AO356_22125 at 4954.276 kb on - strand, within AO356_22125 at 4954.333 kb on + strand, within AO356_22125 at 4954.333 kb on + strand, within AO356_22125 at 4954.334 kb on - strand, within AO356_22125 at 4954.334 kb on - strand, within AO356_22125 at 4954.732 kb on + strand at 4954.732 kb on + strand at 4954.732 kb on + strand at 4954.732 kb on + strand at 4954.733 kb on - strand at 4954.767 kb on - strand at 4954.767 kb on - strand at 4954.768 kb on + strand at 4954.768 kb on + strand at 4954.768 kb on + strand at 4954.768 kb on + strand at 4954.793 kb on + strand at 4954.793 kb on + strand at 4954.793 kb on + strand at 4954.793 kb on + strand at 4954.793 kb on + strand at 4954.818 kb on + strand at 4954.819 kb on - strand at 4954.852 kb on - strand at 4954.964 kb on + strand at 4954.964 kb on + strand at 4954.965 kb on - strand at 4954.965 kb on - strand at 4954.987 kb on + strand at 4954.987 kb on + strand at 4954.987 kb on + strand at 4955.029 kb on + strand at 4955.030 kb on - strand at 4955.030 kb on - strand at 4955.031 kb on + strand at 4955.031 kb on + strand at 4955.031 kb on + strand at 4955.031 kb on + strand at 4955.031 kb on + strand at 4955.031 kb on + strand at 4955.031 kb on + strand at 4955.031 kb on + strand at 4955.031 kb on + strand at 4955.031 kb on + strand at 4955.031 kb on + strand at 4955.032 kb on - strand at 4955.032 kb on - strand at 4955.032 kb on - strand at 4955.032 kb on - strand at 4955.032 kb on - strand at 4955.032 kb on - strand at 4955.032 kb on - strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.036 kb on - strand at 4955.036 kb on - strand at 4955.036 kb on - strand at 4955.036 kb on - strand at 4955.036 kb on - strand at 4955.036 kb on - strand at 4955.036 kb on - strand at 4955.039 kb on + strand at 4955.039 kb on + strand at 4955.039 kb on + strand at 4955.040 kb on - strand at 4955.040 kb on - strand at 4955.040 kb on - strand at 4955.040 kb on - strand at 4955.040 kb on - strand at 4955.040 kb on - strand at 4955.040 kb on - strand at 4955.065 kb on - strand at 4955.118 kb on + strand, within AO356_22130 at 4955.118 kb on + strand, within AO356_22130 at 4955.197 kb on - strand, within AO356_22130 at 4955.201 kb on + strand, within AO356_22130 at 4955.202 kb on - strand, within AO356_22130 at 4955.202 kb on - strand, within AO356_22130 at 4955.202 kb on - strand, within AO356_22130 at 4955.282 kb on + strand at 4955.344 kb on + strand at 4955.344 kb on + strand at 4955.345 kb on - strand at 4955.345 kb on - strand at 4955.345 kb on - strand at 4955.345 kb on - strand at 4955.345 kb on - strand at 4955.451 kb on - strand, within AO356_22135 at 4955.487 kb on - strand, within AO356_22135 at 4955.487 kb on - strand, within AO356_22135 at 4955.487 kb on - strand, within AO356_22135 at 4955.513 kb on + strand, within AO356_22135 at 4955.513 kb on + strand, within AO356_22135 at 4955.564 kb on + strand, within AO356_22135 at 4955.564 kb on + strand, within AO356_22135 at 4955.564 kb on + strand, within AO356_22135 at 4955.564 kb on + strand, within AO356_22135 at 4955.565 kb on - strand, within AO356_22135 at 4955.565 kb on - strand, within AO356_22135 at 4955.628 kb on + strand, within AO356_22135 at 4955.629 kb on - strand, within AO356_22135 at 4955.629 kb on - strand, within AO356_22135 at 4955.654 kb on + strand, within AO356_22135 at 4955.654 kb on + strand, within AO356_22135 at 4955.654 kb on + strand, within AO356_22135 at 4955.654 kb on + strand, within AO356_22135 at 4955.655 kb on - strand, within AO356_22135 at 4955.655 kb on - strand, within AO356_22135 at 4955.655 kb on - strand, within AO356_22135 at 4955.655 kb on - strand, within AO356_22135 at 4955.655 kb on - strand, within AO356_22135 at 4955.655 kb on - strand, within AO356_22135 at 4955.760 kb on - strand, within AO356_22135 at 4955.760 kb on - strand, within AO356_22135 at 4955.760 kb on - strand, within AO356_22135 at 4955.760 kb on - strand, within AO356_22135 at 4955.927 kb on + strand, within AO356_22135 at 4955.927 kb on + strand, within AO356_22135 at 4955.927 kb on + strand, within AO356_22135 at 4955.927 kb on + strand, within AO356_22135 at 4955.927 kb on + strand, within AO356_22135 at 4955.927 kb on + strand, within AO356_22135 at 4955.927 kb on + strand, within AO356_22135 at 4955.927 kb on + strand, within AO356_22135 at 4955.927 kb on + strand, within AO356_22135 at 4955.927 kb on + strand, within AO356_22135 at 4955.927 kb on + strand, within AO356_22135 at 4955.928 kb on - strand, within AO356_22135 at 4955.928 kb on - strand, within AO356_22135 at 4955.928 kb on - strand, within AO356_22135 at 4955.928 kb on - strand, within AO356_22135 at 4955.928 kb on - strand, within AO356_22135 at 4955.928 kb on - strand, within AO356_22135 at 4955.928 kb on - strand, within AO356_22135 at 4955.969 kb on - strand, within AO356_22135 at 4956.167 kb on + strand, within AO356_22135 at 4956.168 kb on - strand, within AO356_22135 at 4956.168 kb on - strand, within AO356_22135 at 4956.203 kb on + strand, within AO356_22135 at 4956.203 kb on + strand, within AO356_22135 at 4956.203 kb on + strand, within AO356_22135 at 4956.204 kb on - strand, within AO356_22135 at 4956.204 kb on - strand, within AO356_22135 at 4956.204 kb on - strand, within AO356_22135 at 4956.204 kb on - strand, within AO356_22135
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.04 mM remove 4,954,146 + AO356_22125 0.71 -1.6 4,954,146 + AO356_22125 0.71 -0.3 4,954,147 - AO356_22125 0.71 -0.2 4,954,147 - AO356_22125 0.71 -0.1 4,954,275 + AO356_22125 0.77 -1.3 4,954,276 - AO356_22125 0.77 -0.6 4,954,333 + AO356_22125 0.79 +0.4 4,954,333 + AO356_22125 0.79 +0.9 4,954,334 - AO356_22125 0.79 -1.7 4,954,334 - AO356_22125 0.79 +1.1 4,954,732 + -1.3 4,954,732 + +0.7 4,954,732 + +0.5 4,954,732 + +1.0 4,954,733 - +0.2 4,954,767 - +1.3 4,954,767 - -0.1 4,954,768 + -0.3 4,954,768 + -0.8 4,954,768 + -0.7 4,954,768 + -0.1 4,954,793 + -2.6 4,954,793 + -0.2 4,954,793 + -0.8 4,954,793 + +0.3 4,954,793 + -0.4 4,954,818 + -0.5 4,954,819 - -0.6 4,954,852 - -1.2 4,954,964 + -1.6 4,954,964 + +0.3 4,954,965 - -0.1 4,954,965 - -0.6 4,954,987 + -1.7 4,954,987 + +0.3 4,954,987 + -1.1 4,955,029 + +0.1 4,955,030 - +0.6 4,955,030 - -0.3 4,955,031 + +0.8 4,955,031 + +1.6 4,955,031 + -1.6 4,955,031 + -0.1 4,955,031 + +0.5 4,955,031 + -0.4 4,955,031 + -0.6 4,955,031 + +0.4 4,955,031 + -0.0 4,955,031 + +0.2 4,955,031 + -2.0 4,955,032 - -0.8 4,955,032 - -1.2 4,955,032 - +1.5 4,955,032 - +0.8 4,955,032 - +0.6 4,955,032 - +0.4 4,955,032 - -0.1 4,955,035 + -0.1 4,955,035 + -0.5 4,955,035 + -0.7 4,955,035 + +0.4 4,955,035 + +0.2 4,955,035 + -1.1 4,955,035 + -0.7 4,955,035 + +0.4 4,955,035 + -1.9 4,955,035 + -2.1 4,955,035 + +0.6 4,955,035 + +0.4 4,955,035 + +1.0 4,955,035 + +0.1 4,955,036 - -1.3 4,955,036 - +0.1 4,955,036 - +0.7 4,955,036 - +0.6 4,955,036 - +0.9 4,955,036 - +0.4 4,955,036 - -0.7 4,955,039 + -1.6 4,955,039 + +0.4 4,955,039 + +0.5 4,955,040 - +1.9 4,955,040 - -1.1 4,955,040 - +1.1 4,955,040 - +0.6 4,955,040 - -1.7 4,955,040 - +0.2 4,955,040 - +0.4 4,955,065 - +0.5 4,955,118 + AO356_22130 0.15 +0.6 4,955,118 + AO356_22130 0.15 -2.6 4,955,197 - AO356_22130 0.57 -0.4 4,955,201 + AO356_22130 0.59 +0.3 4,955,202 - AO356_22130 0.60 +0.9 4,955,202 - AO356_22130 0.60 +1.1 4,955,202 - AO356_22130 0.60 -1.3 4,955,282 + +0.1 4,955,344 + +1.3 4,955,344 + -0.3 4,955,345 - +0.6 4,955,345 - +0.2 4,955,345 - +0.3 4,955,345 - -1.0 4,955,345 - -1.0 4,955,451 - AO356_22135 0.14 +0.7 4,955,487 - AO356_22135 0.17 +0.3 4,955,487 - AO356_22135 0.17 +0.9 4,955,487 - AO356_22135 0.17 -0.9 4,955,513 + AO356_22135 0.19 -0.4 4,955,513 + AO356_22135 0.19 -1.1 4,955,564 + AO356_22135 0.23 +0.3 4,955,564 + AO356_22135 0.23 +1.0 4,955,564 + AO356_22135 0.23 +0.0 4,955,564 + AO356_22135 0.23 -0.3 4,955,565 - AO356_22135 0.23 +0.6 4,955,565 - AO356_22135 0.23 -0.4 4,955,628 + AO356_22135 0.28 -0.1 4,955,629 - AO356_22135 0.28 -0.7 4,955,629 - AO356_22135 0.28 +0.7 4,955,654 + AO356_22135 0.30 +0.2 4,955,654 + AO356_22135 0.30 -2.0 4,955,654 + AO356_22135 0.30 -0.6 4,955,654 + AO356_22135 0.30 +0.5 4,955,655 - AO356_22135 0.30 -1.1 4,955,655 - AO356_22135 0.30 +0.3 4,955,655 - AO356_22135 0.30 +0.1 4,955,655 - AO356_22135 0.30 +1.1 4,955,655 - AO356_22135 0.30 +0.3 4,955,655 - AO356_22135 0.30 +0.3 4,955,760 - AO356_22135 0.39 +0.2 4,955,760 - AO356_22135 0.39 -0.9 4,955,760 - AO356_22135 0.39 -0.6 4,955,760 - AO356_22135 0.39 +1.1 4,955,927 + AO356_22135 0.52 +0.5 4,955,927 + AO356_22135 0.52 +0.5 4,955,927 + AO356_22135 0.52 -0.8 4,955,927 + AO356_22135 0.52 +0.3 4,955,927 + AO356_22135 0.52 -0.6 4,955,927 + AO356_22135 0.52 +0.7 4,955,927 + AO356_22135 0.52 +0.1 4,955,927 + AO356_22135 0.52 -0.4 4,955,927 + AO356_22135 0.52 +0.3 4,955,927 + AO356_22135 0.52 -0.2 4,955,927 + AO356_22135 0.52 -1.8 4,955,928 - AO356_22135 0.52 +0.3 4,955,928 - AO356_22135 0.52 +0.2 4,955,928 - AO356_22135 0.52 -0.8 4,955,928 - AO356_22135 0.52 +1.0 4,955,928 - AO356_22135 0.52 -0.6 4,955,928 - AO356_22135 0.52 +0.5 4,955,928 - AO356_22135 0.52 +0.8 4,955,969 - AO356_22135 0.55 +0.7 4,956,167 + AO356_22135 0.71 +0.1 4,956,168 - AO356_22135 0.71 +0.4 4,956,168 - AO356_22135 0.71 +0.1 4,956,203 + AO356_22135 0.74 -0.2 4,956,203 + AO356_22135 0.74 +1.9 4,956,203 + AO356_22135 0.74 -0.5 4,956,204 - AO356_22135 0.74 +0.3 4,956,204 - AO356_22135 0.74 -1.8 4,956,204 - AO356_22135 0.74 +0.1 4,956,204 - AO356_22135 0.74 -0.0
Or see this region's nucleotide sequence