Experiment: Chlorite 0.04 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_17745 and AO356_17750 are separated by 142 nucleotides AO356_17750 and AO356_17755 are separated by 157 nucleotides
AO356_17745: AO356_17745 - alpha/beta hydrolase, at 4,004,510 to 4,005,529
_17745
AO356_17750: AO356_17750 - LysR family transcriptional regulator, at 4,005,672 to 4,006,553
_17750
AO356_17755: AO356_17755 - hypothetical protein, at 4,006,711 to 4,008,342
_17755
Position (kb)
4005
4006
4007 Strain fitness (log2 ratio)
-1
0
1
2 at 4004.831 kb on + strand, within AO356_17745 at 4004.831 kb on + strand, within AO356_17745 at 4004.832 kb on - strand, within AO356_17745 at 4004.862 kb on - strand, within AO356_17745 at 4004.862 kb on - strand, within AO356_17745 at 4004.862 kb on - strand, within AO356_17745 at 4004.863 kb on + strand, within AO356_17745 at 4004.864 kb on - strand, within AO356_17745 at 4004.916 kb on + strand, within AO356_17745 at 4004.916 kb on + strand, within AO356_17745 at 4004.916 kb on + strand, within AO356_17745 at 4004.917 kb on - strand, within AO356_17745 at 4004.917 kb on - strand, within AO356_17745 at 4004.917 kb on - strand, within AO356_17745 at 4004.931 kb on + strand, within AO356_17745 at 4004.931 kb on + strand, within AO356_17745 at 4004.932 kb on - strand, within AO356_17745 at 4005.197 kb on + strand, within AO356_17745 at 4005.197 kb on + strand, within AO356_17745 at 4005.456 kb on - strand at 4005.530 kb on + strand at 4005.531 kb on - strand at 4005.750 kb on + strand at 4005.750 kb on + strand at 4005.750 kb on + strand at 4005.751 kb on - strand at 4006.123 kb on + strand, within AO356_17750 at 4006.124 kb on - strand, within AO356_17750 at 4006.124 kb on - strand, within AO356_17750 at 4006.124 kb on - strand, within AO356_17750 at 4006.275 kb on + strand, within AO356_17750 at 4006.275 kb on + strand, within AO356_17750 at 4006.276 kb on - strand, within AO356_17750 at 4006.276 kb on - strand, within AO356_17750 at 4006.409 kb on - strand, within AO356_17750 at 4006.585 kb on + strand at 4006.585 kb on + strand at 4006.586 kb on - strand at 4006.586 kb on - strand at 4006.586 kb on - strand at 4006.586 kb on - strand at 4006.586 kb on - strand at 4006.586 kb on - strand at 4006.588 kb on + strand at 4006.633 kb on + strand at 4006.634 kb on - strand at 4006.685 kb on + strand at 4006.730 kb on + strand at 4006.730 kb on + strand at 4006.730 kb on + strand at 4006.731 kb on - strand at 4006.731 kb on - strand at 4006.731 kb on - strand at 4006.742 kb on + strand at 4006.742 kb on + strand at 4006.743 kb on - strand at 4006.805 kb on - strand at 4006.828 kb on - strand at 4006.910 kb on + strand, within AO356_17755 at 4006.910 kb on + strand, within AO356_17755 at 4006.910 kb on + strand, within AO356_17755 at 4006.910 kb on + strand, within AO356_17755 at 4006.910 kb on + strand, within AO356_17755 at 4006.910 kb on + strand, within AO356_17755 at 4006.911 kb on - strand, within AO356_17755 at 4006.911 kb on - strand, within AO356_17755 at 4006.911 kb on - strand, within AO356_17755 at 4007.283 kb on - strand, within AO356_17755 at 4007.545 kb on + strand, within AO356_17755 at 4007.545 kb on + strand, within AO356_17755 at 4007.553 kb on + strand, within AO356_17755
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.04 mM remove 4,004,831 + AO356_17745 0.31 +0.9 4,004,831 + AO356_17745 0.31 +0.3 4,004,832 - AO356_17745 0.32 -0.4 4,004,862 - AO356_17745 0.35 +0.3 4,004,862 - AO356_17745 0.35 -0.4 4,004,862 - AO356_17745 0.35 +0.4 4,004,863 + AO356_17745 0.35 +0.3 4,004,864 - AO356_17745 0.35 -0.4 4,004,916 + AO356_17745 0.40 -0.1 4,004,916 + AO356_17745 0.40 +1.9 4,004,916 + AO356_17745 0.40 -1.3 4,004,917 - AO356_17745 0.40 +1.0 4,004,917 - AO356_17745 0.40 +0.6 4,004,917 - AO356_17745 0.40 +0.8 4,004,931 + AO356_17745 0.41 -0.2 4,004,931 + AO356_17745 0.41 -0.2 4,004,932 - AO356_17745 0.41 +0.9 4,005,197 + AO356_17745 0.67 +0.4 4,005,197 + AO356_17745 0.67 -0.8 4,005,456 - -1.2 4,005,530 + -0.7 4,005,531 - +2.4 4,005,750 + -0.9 4,005,750 + +1.1 4,005,750 + +1.0 4,005,751 - +0.8 4,006,123 + AO356_17750 0.51 -0.1 4,006,124 - AO356_17750 0.51 +0.6 4,006,124 - AO356_17750 0.51 -1.1 4,006,124 - AO356_17750 0.51 -0.1 4,006,275 + AO356_17750 0.68 +1.2 4,006,275 + AO356_17750 0.68 -0.5 4,006,276 - AO356_17750 0.68 +0.2 4,006,276 - AO356_17750 0.68 -0.1 4,006,409 - AO356_17750 0.84 +1.0 4,006,585 + +0.3 4,006,585 + +1.2 4,006,586 - -0.7 4,006,586 - -0.4 4,006,586 - -0.1 4,006,586 - +0.2 4,006,586 - -0.3 4,006,586 - -0.0 4,006,588 + -0.2 4,006,633 + -0.8 4,006,634 - -0.1 4,006,685 + +0.4 4,006,730 + +0.3 4,006,730 + +0.3 4,006,730 + -0.9 4,006,731 - -0.1 4,006,731 - -0.1 4,006,731 - -0.4 4,006,742 + +0.1 4,006,742 + -0.4 4,006,743 - +0.9 4,006,805 - +1.8 4,006,828 - +0.0 4,006,910 + AO356_17755 0.12 +0.2 4,006,910 + AO356_17755 0.12 +0.8 4,006,910 + AO356_17755 0.12 +0.0 4,006,910 + AO356_17755 0.12 +1.4 4,006,910 + AO356_17755 0.12 -0.8 4,006,910 + AO356_17755 0.12 -0.4 4,006,911 - AO356_17755 0.12 +0.8 4,006,911 - AO356_17755 0.12 -0.3 4,006,911 - AO356_17755 0.12 -0.2 4,007,283 - AO356_17755 0.35 -0.6 4,007,545 + AO356_17755 0.51 -1.4 4,007,545 + AO356_17755 0.51 -0.7 4,007,553 + AO356_17755 0.52 +0.6
Or see this region's nucleotide sequence