Experiment: 2 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2387 and DvMF_2388 overlap by 37 nucleotides DvMF_2388 and DvMF_2389 are separated by 362 nucleotides
DvMF_2387: DvMF_2387 - glutamate synthase (NADPH) (RefSeq), at 3,016,863 to 3,017,990
_2387
DvMF_2388: DvMF_2388 - ferredoxin-dependent glutamate synthase (RefSeq), at 3,017,954 to 3,019,588
_2388
DvMF_2389: DvMF_2389 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq), at 3,019,951 to 3,022,284
_2389
Position (kb)
3017
3018
3019
3020 Strain fitness (log2 ratio)
-1
0
1 at 3017.085 kb on - strand, within DvMF_2387 at 3017.299 kb on + strand, within DvMF_2387 at 3017.335 kb on + strand, within DvMF_2387 at 3017.638 kb on - strand, within DvMF_2387 at 3017.839 kb on + strand, within DvMF_2387 at 3017.894 kb on + strand at 3017.927 kb on - strand at 3017.979 kb on + strand at 3018.033 kb on + strand at 3018.052 kb on + strand at 3018.097 kb on - strand at 3018.118 kb on - strand, within DvMF_2388 at 3018.234 kb on - strand, within DvMF_2388 at 3018.358 kb on + strand, within DvMF_2388 at 3018.442 kb on - strand, within DvMF_2388 at 3018.598 kb on - strand, within DvMF_2388 at 3018.610 kb on + strand, within DvMF_2388 at 3018.886 kb on - strand, within DvMF_2388 at 3019.218 kb on - strand, within DvMF_2388 at 3019.233 kb on - strand, within DvMF_2388 at 3019.311 kb on - strand, within DvMF_2388 at 3019.495 kb on - strand at 3019.497 kb on + strand at 3020.083 kb on + strand at 3020.093 kb on - strand at 3020.158 kb on - strand at 3020.227 kb on + strand, within DvMF_2389 at 3020.257 kb on + strand, within DvMF_2389 at 3020.296 kb on + strand, within DvMF_2389 at 3020.296 kb on + strand, within DvMF_2389 at 3020.304 kb on - strand, within DvMF_2389 at 3020.448 kb on - strand, within DvMF_2389 at 3020.568 kb on + strand, within DvMF_2389
Per-strain Table
Position Strand Gene LocusTag Fraction 2 days starvation 37C remove 3,017,085 - DvMF_2387 0.20 -1.2 3,017,299 + DvMF_2387 0.39 -0.9 3,017,335 + DvMF_2387 0.42 -0.2 3,017,638 - DvMF_2387 0.69 -0.5 3,017,839 + DvMF_2387 0.87 -0.6 3,017,894 + -1.2 3,017,927 - -1.3 3,017,979 + -0.4 3,018,033 + -0.5 3,018,052 + +0.2 3,018,097 - -0.6 3,018,118 - DvMF_2388 0.10 -0.3 3,018,234 - DvMF_2388 0.17 -1.5 3,018,358 + DvMF_2388 0.25 -0.3 3,018,442 - DvMF_2388 0.30 -0.9 3,018,598 - DvMF_2388 0.39 -0.8 3,018,610 + DvMF_2388 0.40 -0.2 3,018,886 - DvMF_2388 0.57 -0.6 3,019,218 - DvMF_2388 0.77 -0.7 3,019,233 - DvMF_2388 0.78 -0.6 3,019,311 - DvMF_2388 0.83 -0.6 3,019,495 - -0.9 3,019,497 + -0.1 3,020,083 + -0.8 3,020,093 - -0.6 3,020,158 - -0.9 3,020,227 + DvMF_2389 0.12 -0.0 3,020,257 + DvMF_2389 0.13 -0.0 3,020,296 + DvMF_2389 0.15 -0.6 3,020,296 + DvMF_2389 0.15 +1.5 3,020,304 - DvMF_2389 0.15 -0.1 3,020,448 - DvMF_2389 0.21 -1.2 3,020,568 + DvMF_2389 0.26 +1.3
Or see this region's nucleotide sequence