Experiment: 2 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0599 and DvMF_0600 are separated by 496 nucleotides DvMF_0600 and DvMF_0601 are separated by 386 nucleotides
DvMF_0599: DvMF_0599 - HAD-superfamily hydrolase, subfamily IIA (RefSeq), at 710,773 to 711,540
_0599
DvMF_0600: DvMF_0600 - degV family protein (RefSeq), at 712,037 to 714,088
_0600
DvMF_0601: DvMF_0601 - hypothetical protein (RefSeq), at 714,475 to 714,708
_0601
Position (kb) 712
713
714
715 Strain fitness (log2 ratio) -1
0
1 at 711.111 kb on + strand, within DvMF_0599 at 711.471 kb on - strand at 711.631 kb on - strand at 711.827 kb on + strand at 712.078 kb on - strand at 712.165 kb on + strand at 712.171 kb on + strand at 712.418 kb on - strand, within DvMF_0600 at 712.797 kb on - strand, within DvMF_0600 at 712.924 kb on - strand, within DvMF_0600 at 713.350 kb on + strand, within DvMF_0600 at 713.463 kb on + strand, within DvMF_0600 at 713.495 kb on + strand, within DvMF_0600 at 713.503 kb on - strand, within DvMF_0600 at 713.577 kb on + strand, within DvMF_0600 at 713.597 kb on - strand, within DvMF_0600 at 713.801 kb on - strand, within DvMF_0600 at 713.811 kb on - strand, within DvMF_0600 at 713.867 kb on - strand, within DvMF_0600 at 713.990 kb on + strand at 714.159 kb on + strand at 714.594 kb on + strand, within DvMF_0601 at 714.602 kb on - strand, within DvMF_0601 at 714.888 kb on + strand at 715.034 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2 days starvation 37C remove 711,111 + DvMF_0599 0.44 -0.2 711,471 - -0.5 711,631 - +0.7 711,827 + -0.1 712,078 - -0.5 712,165 + -0.5 712,171 + -0.2 712,418 - DvMF_0600 0.19 -0.5 712,797 - DvMF_0600 0.37 -0.5 712,924 - DvMF_0600 0.43 -1.1 713,350 + DvMF_0600 0.64 -0.4 713,463 + DvMF_0600 0.69 -0.3 713,495 + DvMF_0600 0.71 +0.1 713,503 - DvMF_0600 0.71 +1.3 713,577 + DvMF_0600 0.75 -0.2 713,597 - DvMF_0600 0.76 -0.8 713,801 - DvMF_0600 0.86 -0.2 713,811 - DvMF_0600 0.86 -0.3 713,867 - DvMF_0600 0.89 +0.5 713,990 + -0.9 714,159 + -1.1 714,594 + DvMF_0601 0.51 -0.3 714,602 - DvMF_0601 0.54 -1.2 714,888 + -0.4 715,034 + +0.5
Or see this region's nucleotide sequence