Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3443

Experiment: BHIS with Vancomycin 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Vancomycin 0.016 mg/ml
4,435,053	-		BT3442	0.81	-1.6
4,435,108	-		BT3442	0.84	-0.5
4,435,124	+		BT3442	0.85	-0.2
4,435,141	-		BT3442	0.86	-0.1
4,435,176	+		BT3442	0.88	+0.1
4,435,176	+		BT3442	0.88	+0.1
4,435,198	-		BT3442	0.90	-2.1
4,435,222	+				-0.5
4,435,222	+				-0.3
4,435,327	+				-1.1
4,435,328	-				-3.3
4,435,339	-				+0.5
4,435,339	-				+0.1
4,435,343	-				-0.5
4,435,352	-				-2.7
4,435,352	-				-1.8
4,435,352	-				-1.3
4,435,387	+				-2.4
4,435,486	-				+0.3
4,435,572	+				+2.9
4,435,588	+				-1.0
4,435,589	-				-0.7
4,435,612	+				-1.3
4,435,615	+				-0.0
4,435,624	-				+1.3
4,435,624	-				-1.9
4,435,649	-				+0.9
4,435,674	+				+0.3
4,435,761	-				-0.9
4,435,761	-				-0.4
4,435,787	-				+0.3
4,435,799	+				-1.2
4,435,799	+				-1.5
4,435,800	-				-1.6
4,435,800	-				-1.2
4,435,800	-				-0.8
4,435,800	-				+1.3
4,435,800	-				-1.3
4,435,800	-				+0.3
4,435,810	-				+1.1
4,435,848	-				-2.9
4,435,848	-				-0.5
4,435,920	+				-2.9
4,435,931	-				-0.2
4,436,041	-				-2.4
4,436,115	+		BT3443	0.26	+0.5
4,436,115	+		BT3443	0.26	-1.7
4,436,186	+		BT3443	0.44	-1.9
4,436,186	+		BT3443	0.44	-1.5
4,436,187	-		BT3443	0.44	-2.9
4,436,187	-		BT3443	0.44	-1.6
4,436,253	-		BT3443	0.60	-3.2
4,436,326	-		BT3443	0.78	-1.4
4,436,371	+		BT3443	0.89	-2.9
4,436,464	-				-2.3
4,436,492	-				-1.6
4,436,495	-				-3.5
4,436,526	-				-0.9