Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2062

Experiment: BHIS with Vancomycin 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Vancomycin 0.016 mg/ml
2,579,880	+				-0.6
2,580,741	-				-1.9
2,580,890	+				-1.4
2,580,890	+				-0.6
2,580,972	+				-0.6
2,580,988	+		BT2062	0.11	-0.4
2,580,989	-		BT2062	0.11	-1.4
2,580,995	+		BT2062	0.12	-1.4
2,580,996	-		BT2062	0.12	-2.4
2,580,996	-		BT2062	0.12	-0.6
2,580,998	-		BT2062	0.12	+0.4
2,580,998	-		BT2062	0.12	+0.3
2,580,999	+		BT2062	0.12	-1.7
2,580,999	+		BT2062	0.12	+0.4
2,580,999	+		BT2062	0.12	-0.5
2,580,999	+		BT2062	0.12	-0.8
2,580,999	+		BT2062	0.12	-2.2
2,581,000	-		BT2062	0.12	-0.2
2,581,000	-		BT2062	0.12	-1.0
2,581,009	-		BT2062	0.13	-1.8
2,581,058	-		BT2062	0.18	+0.5
2,581,061	+		BT2062	0.19	-0.9
2,581,061	+				+1.0
2,581,149	-		BT2062	0.28	-0.4
2,581,282	-		BT2062	0.41	-0.6
2,581,306	-		BT2062	0.44	-0.1
2,581,750	+		BT2062	0.89	-1.6
2,581,751	-		BT2062	0.89	-1.2
2,581,751	-		BT2062	0.89	-0.0
2,581,776	+				+2.0
2,581,781	-				-0.2
2,581,808	+				-1.3
2,581,838	-				-1.9
2,581,855	+				-0.6
2,581,857	+				-0.6
2,581,858	-				-1.0
2,581,861	-				-0.8
2,581,861	-				+1.5
2,581,861	-				-0.0
2,581,869	+				-0.4
2,581,870	-				-3.5
2,581,884	+				-0.5
2,581,885	-				-1.9
2,581,889	+				-1.4
2,581,949	-				-0.0
2,581,954	+				-1.5
2,581,954	+				+1.0
2,581,954	+				-0.4
2,581,999	+				+1.2
2,582,051	-				+1.0
2,582,076	+				+0.7
2,582,129	+		BT2063	0.11	-3.5
2,582,130	-		BT2063	0.11	-2.2
2,582,131	+		BT2063	0.11	+0.4
2,582,143	+		BT2063	0.12	+0.4
2,582,144	-		BT2063	0.12	-1.7
2,582,159	+		BT2063	0.13	-1.4
2,582,172	+		BT2063	0.14	-0.8
2,582,173	-		BT2063	0.14	-0.4
2,582,201	-		BT2063	0.16	-0.3
2,582,368	-		BT2063	0.29	-1.6
2,582,382	+		BT2063	0.30	-1.6
2,582,749	+		BT2063	0.59	-2.4
2,582,843	-		BT2063	0.66	-2.7
2,582,858	-		BT2063	0.67	-2.9
2,582,858	-		BT2063	0.67	+1.4