Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1376

Experiment: nitrite 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite 10 mM
1,450,067	+		Ga0059261_1375	0.33	-0.6
1,450,136	+		Ga0059261_1375	0.38	+0.2
1,450,137	-		Ga0059261_1375	0.38	+0.5
1,450,154	+				+2.3
1,450,154	+		Ga0059261_1375	0.39	-0.4
1,450,154	+		Ga0059261_1375	0.39	+0.0
1,450,154	+		Ga0059261_1375	0.39	+1.3
1,450,154	+		Ga0059261_1375	0.39	+0.3
1,450,154	+		Ga0059261_1375	0.39	+1.5
1,450,154	+		Ga0059261_1375	0.39	+0.3
1,450,154	+		Ga0059261_1375	0.39	-0.1
1,450,154	+		Ga0059261_1375	0.39	-0.3
1,450,155	-		Ga0059261_1375	0.39	+0.9
1,450,155	-		Ga0059261_1375	0.39	-0.2
1,450,155	-		Ga0059261_1375	0.39	-0.3
1,450,155	-		Ga0059261_1375	0.39	+0.6
1,450,155	-		Ga0059261_1375	0.39	-0.7
1,450,155	-		Ga0059261_1375	0.39	-0.9
1,450,155	-		Ga0059261_1375	0.39	-0.6
1,450,155	-		Ga0059261_1375	0.39	+1.2
1,450,155	-		Ga0059261_1375	0.39	+0.5
1,450,155	-		Ga0059261_1375	0.39	+0.5
1,450,155	-		Ga0059261_1375	0.39	+0.8
1,450,156	+		Ga0059261_1375	0.39	+0.6
1,450,156	+		Ga0059261_1375	0.39	+0.3
1,450,157	-		Ga0059261_1375	0.39	+0.7
1,450,157	-		Ga0059261_1375	0.39	-0.1
1,450,311	-		Ga0059261_1375	0.51	+0.3
1,450,311	-		Ga0059261_1375	0.51	+0.1
1,450,311	-		Ga0059261_1375	0.51	+1.9
1,450,311	-		Ga0059261_1375	0.51	-0.8
1,450,311	-		Ga0059261_1375	0.51	+0.4
1,450,311	-		Ga0059261_1375	0.51	+0.4
1,450,433	+		Ga0059261_1375	0.60	-0.5
1,450,433	+		Ga0059261_1375	0.60	+0.3
1,450,433	+		Ga0059261_1375	0.60	-0.1
1,450,433	+		Ga0059261_1375	0.60	+1.1
1,450,434	-		Ga0059261_1375	0.60	+0.0
1,450,434	-		Ga0059261_1375	0.60	+0.1
1,450,434	-		Ga0059261_1375	0.60	-0.4
1,450,434	-		Ga0059261_1375	0.60	+0.1
1,450,730	+		Ga0059261_1375	0.82	+0.0
1,450,731	-		Ga0059261_1375	0.82	-0.7
1,450,965	-				+0.1
1,451,019	-				-0.3
1,451,050	-				-1.1
1,451,074	+				-0.8
1,451,074	+				+0.8
1,451,074	+				+0.4
1,451,074	+				-0.2
1,451,074	+				+0.1
1,451,074	+				+0.6
1,451,075	-				+0.6
1,451,083	+				-0.3
1,451,251	+		Ga0059261_1376	0.25	+1.8
1,451,251	+		Ga0059261_1376	0.25	+0.4
1,451,251	+		Ga0059261_1376	0.25	-0.2
1,451,251	+		Ga0059261_1376	0.25	-0.0
1,451,252	-		Ga0059261_1376	0.26	-0.0
1,451,252	-		Ga0059261_1376	0.26	+0.3
1,451,253	+		Ga0059261_1376	0.26	-0.5
1,451,253	+		Ga0059261_1376	0.26	+1.0
1,451,253	+		Ga0059261_1376	0.26	-0.5
1,451,253	+		Ga0059261_1376	0.26	+0.7
1,451,253	+		Ga0059261_1376	0.26	-1.2
1,451,253	+		Ga0059261_1376	0.26	-0.1
1,451,254	-		Ga0059261_1376	0.26	-1.6
1,451,254	-		Ga0059261_1376	0.26	-1.0
1,451,254	-		Ga0059261_1376	0.26	+1.3
1,451,254	-		Ga0059261_1376	0.26	-0.4
1,451,254	-		Ga0059261_1376	0.26	+0.7
1,451,254	-		Ga0059261_1376	0.26	+0.7
1,451,254	-				-0.3
1,451,254	-		Ga0059261_1376	0.26	-0.5
1,451,335	+		Ga0059261_1376	0.36	+1.0
1,451,336	-		Ga0059261_1376	0.37	-1.7
1,451,336	-		Ga0059261_1376	0.37	+0.4
1,451,336	-		Ga0059261_1376	0.37	-0.4
1,451,336	-		Ga0059261_1376	0.37	+1.8
1,451,336	-		Ga0059261_1376	0.37	-0.0
1,451,337	+		Ga0059261_1376	0.37	+0.0
1,451,337	+		Ga0059261_1376	0.37	-0.0
1,451,337	+		Ga0059261_1376	0.37	-0.6
1,451,337	+		Ga0059261_1376	0.37	-0.6
1,451,337	+		Ga0059261_1376	0.37	+0.0
1,451,337	+		Ga0059261_1376	0.37	+0.9
1,451,338	-		Ga0059261_1376	0.37	+0.1
1,451,338	-		Ga0059261_1376	0.37	-0.3
1,451,338	-		Ga0059261_1376	0.37	-0.1
1,451,338	-		Ga0059261_1376	0.37	-2.4
1,451,557	+		Ga0059261_1376	0.65	-0.6
1,451,557	+		Ga0059261_1376	0.65	+1.0
1,451,557	+		Ga0059261_1376	0.65	+1.3
1,451,558	-		Ga0059261_1376	0.66	+0.3
1,451,599	+		Ga0059261_1376	0.71	+0.8
1,451,599	+		Ga0059261_1376	0.71	-0.0
1,451,630	-		Ga0059261_1376	0.75	-0.1
1,451,630	-		Ga0059261_1376	0.75	+1.3
1,451,630	-		Ga0059261_1376	0.75	-0.1
1,451,630	-		Ga0059261_1376	0.75	-0.3
1,451,630	-		Ga0059261_1376	0.75	+0.1
1,451,739	+		Ga0059261_1376	0.89	+0.5
1,451,739	+		Ga0059261_1376	0.89	+1.0
1,451,739	+		Ga0059261_1376	0.89	-0.0
1,451,740	-		Ga0059261_1376	0.89	+0.5
1,451,755	+				-0.5
1,451,755	+				+0.7
1,451,755	+				-0.6
1,451,755	+				+0.0
1,451,755	+				+0.3
1,451,756	-				-0.3
1,451,756	-				-0.4
1,451,756	-				+0.3
1,451,902	+				+0.1
1,451,902	+				+1.9
1,451,902	+				-1.1
1,451,902	+				-0.0
1,451,903	-				+0.3
1,451,903	-				+0.3
1,451,903	-				-0.7
1,451,903	-				+0.1
1,451,903	-				+0.3
1,451,903	-				-0.0
1,451,903	-				+0.5
1,451,903	-				-0.3
1,451,910	+				-0.9
1,451,910	+				-0.6
1,451,910	+				-0.5
1,451,910	+				-0.6
1,451,910	+				+0.1
1,451,910	+				+0.5
1,451,910	+				+0.1
1,451,910	+				-0.3
1,451,910	+				+1.3
1,451,910	+				+0.1
1,451,910	+				-0.5
1,451,910	+				-0.4
1,451,910	+				+1.0
1,451,910	+				+0.4
1,451,911	-				-0.9
1,451,911	-				+0.0
1,451,911	-				-0.4
1,451,911	-				+0.2
1,451,911	-				+0.4
1,451,911	-				-0.0
1,452,042	+		Ga0059261_1377	0.13	-0.4
1,452,042	+		Ga0059261_1377	0.13	+0.2
1,452,042	+		Ga0059261_1377	0.13	-0.1
1,452,042	+		Ga0059261_1377	0.13	-0.1
1,452,043	-		Ga0059261_1377	0.13	-0.2
1,452,043	-		Ga0059261_1377	0.13	-0.7
1,452,043	-		Ga0059261_1377	0.13	+0.5
1,452,070	+		Ga0059261_1377	0.15	+0.2
1,452,070	+		Ga0059261_1377	0.15	+0.4
1,452,071	-		Ga0059261_1377	0.15	+0.4
1,452,071	-		Ga0059261_1377	0.15	+0.8
1,452,199	-		Ga0059261_1377	0.27	-0.3
1,452,199	-		Ga0059261_1377	0.27	-0.6
1,452,354	-		Ga0059261_1377	0.40	+0.1
1,452,454	+		Ga0059261_1377	0.49	-2.4
1,452,511	+		Ga0059261_1377	0.54	+0.1
1,452,511	+		Ga0059261_1377	0.54	-1.2
1,452,511	+		Ga0059261_1377	0.54	+1.3
1,452,511	+		Ga0059261_1377	0.54	+0.1
1,452,512	-		Ga0059261_1377	0.54	-1.2
1,452,512	-		Ga0059261_1377	0.54	+0.3
1,452,526	+		Ga0059261_1377	0.55	-0.1
1,452,527	-		Ga0059261_1377	0.55	+0.3
1,452,532	+		Ga0059261_1377	0.55	+0.1
1,452,532	+		Ga0059261_1377	0.55	-0.6
1,452,532	+		Ga0059261_1377	0.55	-0.4
1,452,532	+		Ga0059261_1377	0.55	-1.1
1,452,533	-		Ga0059261_1377	0.56	-0.5
1,452,610	+		Ga0059261_1377	0.62	-0.5
1,452,610	+		Ga0059261_1377	0.62	+0.5
1,452,611	-		Ga0059261_1377	0.62	-0.6
1,452,777	+		Ga0059261_1377	0.77	-0.3