Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS33900 and AZOBR_RS33905 are separated by 40 nucleotides AZOBR_RS33905 and AZOBR_RS33910 are separated by 28 nucleotides
AZOBR_RS33900: AZOBR_RS33900 - ADP-L-glycero-D-manno-heptose-6-epimerase, at 149,792 to 150,778
_RS33900
AZOBR_RS33905: AZOBR_RS33905 - D-beta-D-heptose 1-phosphate adenosyltransferase, at 150,819 to 152,276
_RS33905
AZOBR_RS33910: AZOBR_RS33910 - phosphoheptose isomerase, at 152,305 to 152,883
_RS33910
Position (kb) 150
151
152
153 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 150.007 kb on + strand, within AZOBR_RS33900 at 150.122 kb on + strand, within AZOBR_RS33900 at 150.123 kb on - strand, within AZOBR_RS33900 at 150.123 kb on - strand, within AZOBR_RS33900 at 150.123 kb on - strand, within AZOBR_RS33900 at 150.143 kb on + strand, within AZOBR_RS33900 at 150.144 kb on - strand, within AZOBR_RS33900 at 150.144 kb on - strand, within AZOBR_RS33900 at 150.144 kb on - strand, within AZOBR_RS33900 at 150.218 kb on + strand, within AZOBR_RS33900 at 150.219 kb on - strand, within AZOBR_RS33900 at 150.219 kb on - strand, within AZOBR_RS33900 at 150.336 kb on - strand, within AZOBR_RS33900 at 150.431 kb on + strand, within AZOBR_RS33900 at 150.432 kb on - strand at 150.432 kb on - strand, within AZOBR_RS33900 at 150.432 kb on - strand, within AZOBR_RS33900 at 150.465 kb on - strand, within AZOBR_RS33900 at 150.465 kb on - strand, within AZOBR_RS33900 at 150.465 kb on - strand, within AZOBR_RS33900 at 150.465 kb on - strand, within AZOBR_RS33900 at 150.465 kb on - strand, within AZOBR_RS33900 at 150.581 kb on + strand, within AZOBR_RS33900 at 150.615 kb on - strand, within AZOBR_RS33900 at 150.647 kb on + strand, within AZOBR_RS33900 at 150.653 kb on + strand, within AZOBR_RS33900 at 150.653 kb on + strand, within AZOBR_RS33900 at 150.653 kb on + strand, within AZOBR_RS33900 at 150.656 kb on + strand, within AZOBR_RS33900 at 150.657 kb on - strand, within AZOBR_RS33900 at 150.657 kb on - strand, within AZOBR_RS33900 at 150.657 kb on - strand, within AZOBR_RS33900 at 150.657 kb on - strand, within AZOBR_RS33900 at 150.753 kb on + strand at 150.754 kb on - strand at 150.828 kb on + strand at 150.828 kb on + strand at 150.828 kb on + strand at 150.828 kb on + strand at 150.829 kb on - strand at 150.829 kb on - strand at 150.829 kb on - strand at 150.829 kb on - strand at 150.834 kb on - strand at 151.290 kb on + strand, within AZOBR_RS33905 at 151.291 kb on - strand, within AZOBR_RS33905 at 151.389 kb on + strand, within AZOBR_RS33905 at 151.390 kb on - strand, within AZOBR_RS33905 at 151.399 kb on - strand, within AZOBR_RS33905 at 152.151 kb on + strand at 152.158 kb on + strand at 152.881 kb on + strand at 152.885 kb on + strand at 152.999 kb on + strand at 153.012 kb on + strand at 153.012 kb on + strand at 153.013 kb on - strand at 153.013 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml remove 150,007 + AZOBR_RS33900 0.22 -1.2 150,122 + AZOBR_RS33900 0.33 -0.4 150,123 - AZOBR_RS33900 0.34 -3.7 150,123 - AZOBR_RS33900 0.34 -4.1 150,123 - AZOBR_RS33900 0.34 -3.5 150,143 + AZOBR_RS33900 0.36 +1.3 150,144 - AZOBR_RS33900 0.36 -4.4 150,144 - AZOBR_RS33900 0.36 -5.3 150,144 - AZOBR_RS33900 0.36 -4.3 150,218 + AZOBR_RS33900 0.43 -0.2 150,219 - AZOBR_RS33900 0.43 -4.5 150,219 - AZOBR_RS33900 0.43 -0.3 150,336 - AZOBR_RS33900 0.55 -1.3 150,431 + AZOBR_RS33900 0.65 -2.2 150,432 - -2.2 150,432 - AZOBR_RS33900 0.65 -5.0 150,432 - AZOBR_RS33900 0.65 -5.0 150,465 - AZOBR_RS33900 0.68 -3.0 150,465 - AZOBR_RS33900 0.68 -4.3 150,465 - AZOBR_RS33900 0.68 -3.7 150,465 - AZOBR_RS33900 0.68 -3.2 150,465 - AZOBR_RS33900 0.68 -3.2 150,581 + AZOBR_RS33900 0.80 +0.7 150,615 - AZOBR_RS33900 0.83 -3.7 150,647 + AZOBR_RS33900 0.87 +0.7 150,653 + AZOBR_RS33900 0.87 +0.9 150,653 + AZOBR_RS33900 0.87 -0.6 150,653 + AZOBR_RS33900 0.87 +0.2 150,656 + AZOBR_RS33900 0.88 -0.6 150,657 - AZOBR_RS33900 0.88 -0.6 150,657 - AZOBR_RS33900 0.88 -2.5 150,657 - AZOBR_RS33900 0.88 -3.0 150,657 - AZOBR_RS33900 0.88 -4.0 150,753 + -1.7 150,754 - -2.9 150,828 + -0.6 150,828 + -2.7 150,828 + +0.5 150,828 + -3.0 150,829 - -5.5 150,829 - -4.4 150,829 - -3.7 150,829 - -1.5 150,834 - -2.5 151,290 + AZOBR_RS33905 0.32 +3.2 151,291 - AZOBR_RS33905 0.32 -2.8 151,389 + AZOBR_RS33905 0.39 -0.3 151,390 - AZOBR_RS33905 0.39 -3.8 151,399 - AZOBR_RS33905 0.40 -3.5 152,151 + +0.6 152,158 + -0.5 152,881 + +0.9 152,885 + +0.6 152,999 + +1.5 153,012 + +0.3 153,012 + -0.7 153,013 - +0.7 153,013 - +0.8
Or see this region's nucleotide sequence